L798_11051 (Zootermopsis nevadensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 L798_11051 T330848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.487 0.319
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.487 0.319
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.487 0.319
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.487 0.319
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.487 0.319
cic
M06452_2.00
Drosophila melanogaster
YYCATTSA

TSAATGRR
B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386
0.428 0.420
Cic
M00195_2.00
Mus musculus
NNTGCTGABN

NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.417 0.406
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR15228 Sox 190 258

Links

Other Sox family TFs
Other Zootermopsis nevadensis TFs

Invalid Input OrderBy

412 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action