LACBIDRAFT_297819 (Laccaria bicolor)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LACBIDRAFT_297819 T330871_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EDR08117 Sox 28 93

Links

Other Sox family TFs
Other Laccaria bicolor TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
K443DRAFT_674317 Laccaria amethystina K443DRAFT_674317 N 0.741
GALMADRAFT_215335 Galerina marginata GALMADRAFT_215335 I 0.686
M413DRAFT_168289 Hebeloma cylindrosporum M413DRAFT_168289 N 0.629
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.507
CC1G_09089 Coprinopsis cinerea CC1G_09089 N 0.494
GLOTRDRAFT_107384 Gloeophyllum trabeum GLOTRDRAFT_107384 I 0.475
PLEOSDRAFT_1090547 Pleurotus ostreatus PLEOSDRAFT_1090547 I 0.472
M407DRAFT_228275 Tulasnella calospora M407DRAFT_228275 N 0.455
estExt_fgenesh3_kg.C_170031 Heterobasidion annosum estExt_fgenesh3_kg.C_170031 I 0.455
HETIRDRAFT_439796 Heterobasidion irregulare HETIRDRAFT_439796 I 0.455
chd3 Oryzias latipes ENSORLG00000007107 N 0.442
ENSTNIG00000004346 Tetraodon nigroviridis ENSTNIG00000004346 N 0.436
SCLCIDRAFT_1214155 Scleroderma citrinum SCLCIDRAFT_1214155 N 0.436
PV09_07652 Verruconis gallopava PV09_07652 I 0.434
CHD4 Echinops telfairi ENSETEG00000005912 N 0.430
XP_002941963 Xenopus tropicalis XP_002941963 N 0.430
CHD4 Microcebus murinus ENSMICG00000006588 N 0.430
ENSMODG00000024829 Monodelphis domestica ENSMODG00000024829 N 0.430
ENSSHAG00000004107 Sarcophilus harrisii ENSSHAG00000004107 N 0.430
CHD4 Ochotona princeps ENSOPRG00000003477 N 0.430
CY34DRAFT_417575 Suillus luteus CY34DRAFT_417575 I 0.427
GG13363 Drosophila erecta FBgn0105635 N 0.426
GK17504 Drosophila willistoni FBgn0219503 N 0.426
PAXRUDRAFT_625911 Paxillus rubicundulus PAXRUDRAFT_625911 N 0.426
MGG_00866 Magnaporthe oryzae MGG_00866 N 0.425
GSTUM_00007488001 Tuber melanosporum GSTUM_00007488001 N 0.422
GUITHDRAFT_161762 Guillardia theta GUITHDRAFT_161762 N 0.421
GUITHDRAFT_116466 Guillardia theta GUITHDRAFT_116466 N 0.418
Moror_16065 Moniliophthora roreri Moror_16065 I 0.416
AZW_EuGene.0200010417 Micromonas sp RCC299 AZW_EuGene.0200010417 I 0.416
mgf019496m Mimulus guttatus mgf019496m I 0.415