CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG231408
(
Lottia gigantea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LotgiG231408
T330952_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.415
0.522
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP231408
Sox
156
224
PRAPLSGYVIYAMERRQQIKEINPELPFVEVTKILGQEWSSMSTDKKQKYLDEASADKQRYIDELKVFQ
Links
Other
Sox
family TFs
Other
Lottia gigantea
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy