LPERR01G21970 (Leersia perrieri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LPERR01G21970 T330959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G21970.1 Sox 51 120

Links

Other Sox family TFs
Other Leersia perrieri TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.574
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.445
F775_05073 Aegilops tauschii F775_05073 I 0.574
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.575
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.435
OB01G34910 Oryza brachyantha OB01G34910 I 0.668
Ca_05351 Cicer arietinum Ca_05351 I 0.417
HMGB5 Arabidopsis thaliana AT4G35570 I 0.435
Ca_05164 Cicer arietinum Ca_05164 N 0.488
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N 0.461
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N 0.461
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N 0.457
mgf009922m Mimulus guttatus mgf009922m N 0.443
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.471
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.472
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N 0.456
29693.m002035 Ricinus communis 29693.m002035 N 0.486
Carubv10024236m.g Capsella rubella Carubv10024236m.g N 0.461
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N 0.490
SapurV1A.0560s0060 Salix purpurea SapurV1A.0560s0060 N 0.469
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.526
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N 0.478
MDP0000695104 Malus domestica MDP0000695104 N 0.480
MDP0000143506 Malus domestica MDP0000143506 N 0.489
Lus10025391.g Linum usitatissimum Lus10025391.g N 0.450
Lus10015268.g Linum usitatissimum Lus10015268.g N 0.462
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.478
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N 0.462
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N 0.478
Ca_05162 Cicer arietinum Ca_05162 N 0.488
TCM_029514 Theobroma cacao TCM_029514 N 0.478
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N 0.541
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.530
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.513
GLYMA08G08840 Glycine max GLYMA08G08840 N 0.474
GLYMA05G25900 Glycine max GLYMA05G25900 N 0.474
Bra021911 Brassica rapa Bra021911 N 0.436
Bo4g182600 Brassica oleracea Bo4g182600 N 0.436
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.600
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.602
AT2G34450 Arabidopsis thaliana AT2G34450 N 0.436
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.585
MTR_4g094622 Medicago truncatula MTR_4g094622 N 0.503
Si003021m.g Setaria italica Si003021m.g N 0.552
Sb03g030540 Sorghum bicolor Sb03g030540 N 0.520
PRUPE_ppa013152mg Prunus persica PRUPE_ppa013152mg N 0.479
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N 0.469
OS01G0666200 Oryza sativa OS01G0666200 N 0.602
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.602
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.602
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.602
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.602
OBART01G25720 Oryza barthii OBART01G25720 N 0.602
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N 0.490