LPERR02G09420 (Leersia perrieri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LPERR02G09420 T330960_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR02G09420.1 Sox 158 223
LPERR02G09420.1 Sox 282 348
LPERR02G09420.1 Sox 410 478

Links

Other Sox family TFs
Other Leersia perrieri TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI02G11890 Oryza meridionalis OMERI02G11890 N 0.656
OB02G19930 Oryza brachyantha OB02G19930 N 0.653
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I 0.638
ONIVA02G12490 Oryza nivara ONIVA02G12490 I 0.638
BGIOSGA006746 Oryza indica BGIOSGA006746 I 0.638
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I 0.638
OBART02G11160 Oryza barthii OBART02G11160 I 0.638
OPUNC02G09900 Oryza punctata OPUNC02G09900 I 0.634
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.627
OLONG_021730 Oryza longistaminata OLONG_021730 N 0.625
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.609
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.606
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.605
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.592
Si017040m.g Setaria italica Si017040m.g I 0.581
MLOC_57360 Hordeum vulgare MLOC_57360 N 0.533
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.521
mgf015439m Mimulus guttatus mgf015439m I 0.493
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.466
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.464
F775_10696 Aegilops tauschii F775_10696 N 0.458
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.451
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.450
30190.m010807 Ricinus communis 30190.m010807 I 0.437
Cla011101 Citrullus lanatus Cla011101 I 0.434
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.427
Pm024077 Prunus mume Pm024077 I 0.427
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.426
TCM_016416 Theobroma cacao TCM_016416 I 0.419
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.416