LPERR08G00140 (Leersia perrieri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LPERR08G00140 T330972_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR08G00140.1 Sox 94 161

Links

Other Sox family TFs
Other Leersia perrieri TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.610
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.610
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.610
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.610
OS08G0101100 Oryza sativa OS08G0101100 I 0.610
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.610
OBART08G00070 Oryza barthii OBART08G00070 I 0.610
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.610
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.610
OB08G10120 Oryza brachyantha OB08G10120 N 0.602
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.567
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.542
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.539
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.537
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.515
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.515
MDP0000205665 Malus domestica MDP0000205665 I 0.514
Si014434m.g Setaria italica Si014434m.g N 0.507
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.507
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.507
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.507
Pm006054 Prunus mume Pm006054 I 0.503
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.503
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.501
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.487
ENSOGAG00000034481 Otolemur garnettii ENSOGAG00000034481 N 0.479
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.474
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I 0.472
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I 0.472
TRIUR3_35367 Triticum urartu TRIUR3_35367 I 0.472
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I 0.472
MLOC_77667 Hordeum vulgare MLOC_77667 I 0.472
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.465
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.465
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.459
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.457
TCM_007659 Theobroma cacao TCM_007659 I 0.456
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.449
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.446
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.439
PK14705.1 Cannabis sativa PK14705.1 I 0.437
Lus10041009.g Linum usitatissimum Lus10041009.g N 0.435
Bra029371 Brassica rapa Bra029371 I 0.433
29669.m000844 Ricinus communis 29669.m000844 I 0.433
Bo2g160920 Brassica oleracea Bo2g160920 I 0.433
fgenesh2_kg.6__1935__AT5G23420.1 Arabidopsis lyrata fgenesh2_kg.6__1935__AT5G23420.1 N 0.432
PDK_20s1355261g001 Phoenix dactylifera PDK_20s1355261g001 N 0.431
PK03866.1 Cannabis sativa PK03866.1 I 0.428
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I 0.426
BRADI3G12920 Brachypodium distachyon BRADI3G12920 I 0.426
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.423
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.422
GL11071 Drosophila persimilis FBgn0148681 N 0.422
Cla009222 Citrullus lanatus Cla009222 I 0.420
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.420
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I 0.419
ACEP16621 Atta cephalotes ACEP16621 N 0.419
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.418
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I 0.416
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I 0.416
Pavir.Fb00026 Panicum virgatum Pavir.Fb00026 N 0.415