CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
M408DRAFT_308571
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_308571
T331033_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM20259
Sox
553
623
PKQAPSMWQLYFADWLQDHKARQPQNKLNIAQAAKEAGQIYKTLSAEAKEDLKKRVQQEKESRERRLAAWQ
KIM20259
Sox
658
730
PKKPLSAYFLFLARIRSDPLLVDEVFGGETETTRQSVLAAQRWREMSDVEKKPFLTQAEHDKIQYDALRKVYE
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M408DRAFT_74753
Serendipita vermifera
M408DRAFT_74753
N
0.669
PIIN_05647
Piriformospora indica
PIIN_05647
N
0.621
CNA04270
Cryptococcus neoformans
CNA04270
N
0.531
L804_02037
Cryptococcus gattii
L804_02037
N
0.531
FOMPIDRAFT_1025562
Fomitopsis pinicola
FOMPIDRAFT_1025562
N
0.523
FIBRA_08488
Fibroporia radiculosa
FIBRA_08488
N
0.519
fgenesh2_pg.C_scaffold_4000344
Heterobasidion annosum
fgenesh2_pg.C_scaffold_4000344
N
0.509
HETIRDRAFT_237963
Heterobasidion irregulare
HETIRDRAFT_237963
N
0.509
PHACADRAFT_249698
Phanerochaete carnosa
PHACADRAFT_249698
N
0.509
SERLA73DRAFT_177720
Serpula lacrymans
SERLA73DRAFT_177720
N
0.508
PHLGIDRAFT_81249
Phlebiopsis gigantea
PHLGIDRAFT_81249
N
0.508
PILCRDRAFT_32440
Piloderma croceum
PILCRDRAFT_32440
N
0.494
BOTBODRAFT_37556
Botryobasidium botryosum
BOTBODRAFT_37556
N
0.492
DICSQDRAFT_161203
Dichomitus squalens
DICSQDRAFT_161203
N
0.490
BN946_scf185015.g92
Trametes cinnabarina
BN946_scf185015.g92
N
0.490
CERSUDRAFT_111079
Ceriporiopsis subvermispora
CERSUDRAFT_111079
N
0.490
JAAARDRAFT_116407
Jaapia argillacea
JAAARDRAFT_116407
N
0.489
V565_038130
Rhizoctonia solani
V565_038130
N
0.485
Moror_13892
Moniliophthora roreri
Moror_13892
N
0.484
CC1G_01334
Coprinopsis cinerea
CC1G_01334
N
0.474
PFL1_04035
Pseudozyma flocculosa
PFL1_04035
N
0.470
M413DRAFT_65005
Hebeloma cylindrosporum
M413DRAFT_65005
N
0.469
GLOTRDRAFT_70334
Gloeophyllum trabeum
GLOTRDRAFT_70334
N
0.469
GALMADRAFT_236555
Galerina marginata
GALMADRAFT_236555
N
0.467
CY34DRAFT_800204
Suillus luteus
CY34DRAFT_800204
N
0.466
PLEOSDRAFT_27233
Pleurotus ostreatus
PLEOSDRAFT_27233
N
0.465
LACBIDRAFT_311571
Laccaria bicolor
LACBIDRAFT_311571
N
0.461
K443DRAFT_675725
Laccaria amethystina
K443DRAFT_675725
N
0.461
SCHCODRAFT_255141
Schizophyllum commune
SCHCODRAFT_255141
N
0.459
K437DRAFT_223452
Tilletiaria anomala
K437DRAFT_223452
N
0.459
M378DRAFT_156363
Amanita muscaria
M378DRAFT_156363
N
0.455
UHOR_02084
Ustilago hordei
UHOR_02084
N
0.452
UM01390
Ustilago maydis
UM01390
N
0.452
PaG_03069
Pseudozyma aphidis
PaG_03069
N
0.448
sr12460
Sporisorium reilianum
sr12460
N
0.448
PAN0_007d3117
Pseudozyma antarctica
PAN0_007d3117
N
0.448
PHSY_004430
Pseudozyma hubeiensis
PHSY_004430
N
0.448
PSEUBRA_SCAF3g03552
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03552
N
0.448
SCLCIDRAFT_1209153
Scleroderma citrinum
SCLCIDRAFT_1209153
N
0.447
PISMIDRAFT_89773
Pisolithus microcarpus
PISMIDRAFT_89773
N
0.441
AGABI2DRAFT_188638
Agaricus bisporus
AGABI2DRAFT_188638
N
0.437
M404DRAFT_124276
Pisolithus tinctorius
M404DRAFT_124276
N
0.434
PAXRUDRAFT_129737
Paxillus rubicundulus
PAXRUDRAFT_129737
N
0.426
EDP42964.1
Malassezia globosa
EDP42964.1
N
0.425