CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_74753
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_74753
T331046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM25196
Sox
24
94
PKQAPSMWQVYFADWLQDHKARQPQDKLNVAQAAKEAGQLYKTLSAEAKEVRSARVQQEKESRERRLTAWQ
KIM25196
Sox
129
201
PKKPLSAYFMFLARIRSDPLLVEEVFGGETETTRQSVLAAQRWREMSDEEKKPFLTQAEHDKIQYEALRKIYE
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PIIN_05647
Piriformospora indica
PIIN_05647
N
0.673
M408DRAFT_308571
Serendipita vermifera
M408DRAFT_308571
N
0.669
HETIRDRAFT_237963
Heterobasidion irregulare
HETIRDRAFT_237963
N
0.535
fgenesh2_pg.C_scaffold_4000344
Heterobasidion annosum
fgenesh2_pg.C_scaffold_4000344
N
0.535
FOMPIDRAFT_1025562
Fomitopsis pinicola
FOMPIDRAFT_1025562
N
0.535
PHACADRAFT_249698
Phanerochaete carnosa
PHACADRAFT_249698
N
0.534
PHLGIDRAFT_81249
Phlebiopsis gigantea
PHLGIDRAFT_81249
N
0.533
FIBRA_08488
Fibroporia radiculosa
FIBRA_08488
N
0.531
BOTBODRAFT_37556
Botryobasidium botryosum
BOTBODRAFT_37556
N
0.521
SERLA73DRAFT_177720
Serpula lacrymans
SERLA73DRAFT_177720
N
0.520
PILCRDRAFT_32440
Piloderma croceum
PILCRDRAFT_32440
N
0.519
CERSUDRAFT_111079
Ceriporiopsis subvermispora
CERSUDRAFT_111079
N
0.516
BN946_scf185015.g92
Trametes cinnabarina
BN946_scf185015.g92
N
0.515
DICSQDRAFT_161203
Dichomitus squalens
DICSQDRAFT_161203
N
0.515
JAAARDRAFT_116407
Jaapia argillacea
JAAARDRAFT_116407
N
0.514
L804_02037
Cryptococcus gattii
L804_02037
N
0.513
CNA04270
Cryptococcus neoformans
CNA04270
N
0.513
V565_038130
Rhizoctonia solani
V565_038130
N
0.512
CC1G_01334
Coprinopsis cinerea
CC1G_01334
N
0.499
Moror_13892
Moniliophthora roreri
Moror_13892
N
0.496
M413DRAFT_65005
Hebeloma cylindrosporum
M413DRAFT_65005
N
0.495
GLOTRDRAFT_70334
Gloeophyllum trabeum
GLOTRDRAFT_70334
N
0.495
GALMADRAFT_236555
Galerina marginata
GALMADRAFT_236555
N
0.493
K443DRAFT_675725
Laccaria amethystina
K443DRAFT_675725
N
0.487
LACBIDRAFT_311571
Laccaria bicolor
LACBIDRAFT_311571
N
0.487
SCHCODRAFT_255141
Schizophyllum commune
SCHCODRAFT_255141
N
0.485
PFL1_04035
Pseudozyma flocculosa
PFL1_04035
N
0.481
M378DRAFT_156363
Amanita muscaria
M378DRAFT_156363
N
0.480
CY34DRAFT_800204
Suillus luteus
CY34DRAFT_800204
N
0.478
PLEOSDRAFT_27233
Pleurotus ostreatus
PLEOSDRAFT_27233
N
0.477
SCLCIDRAFT_1209153
Scleroderma citrinum
SCLCIDRAFT_1209153
N
0.473
PISMIDRAFT_89773
Pisolithus microcarpus
PISMIDRAFT_89773
N
0.467
AGABI2DRAFT_188638
Agaricus bisporus
AGABI2DRAFT_188638
N
0.463
M404DRAFT_124276
Pisolithus tinctorius
M404DRAFT_124276
N
0.459
K437DRAFT_223452
Tilletiaria anomala
K437DRAFT_223452
N
0.455
UHOR_02084
Ustilago hordei
UHOR_02084
N
0.449
UM01390
Ustilago maydis
UM01390
N
0.449
PaG_03069
Pseudozyma aphidis
PaG_03069
N
0.445
PSEUBRA_SCAF3g03552
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03552
N
0.445
sr12460
Sporisorium reilianum
sr12460
N
0.445
PAN0_007d3117
Pseudozyma antarctica
PAN0_007d3117
N
0.445
PHSY_004430
Pseudozyma hubeiensis
PHSY_004430
N
0.445
PAXRUDRAFT_129737
Paxillus rubicundulus
PAXRUDRAFT_129737
N
0.438
M407DRAFT_222046
Tulasnella calospora
M407DRAFT_222046
N
0.416