maker-pag1_scaffold_208-fgenesh-gene-0.7 (Pythium aphanidermatum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-pag1_scaffold_208-fgenesh-gene-0.7 T331136_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPA00000018578 Sox 29 97
EPrPA00000018578 Sox 117 185

Links

Other Sox family TFs
Other Pythium aphanidermatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-par_contig_8731-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8731-fgenesh-gene-0.0 N 0.714
maker-pir_contig_78-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_78-fgenesh-gene-0.0 N 0.687
PYU1_G009481 Pythium ultimum PYU1_G009481 N 0.685
ALNC14_025770 Albugo laibachii ALNC14_025770 N 0.679
fgenesh_scip_prom.28083.225 Phytophthora lateralis fgenesh_scip_prom.28083.225 N 0.678
Phyra73033 Phytophthora ramorum Phyra73033 N 0.678
PITG_16117 Phytophthora infestans PITG_16117 N 0.664
fgenesh_scip_prom.46568.1753 Phytophthora kernoviae fgenesh_scip_prom.46568.1753 N 0.658
F443_05401 Phytophthora parasitica F443_05401 N 0.654
estExt_fgenesh1_kg.C_12090001 Phytophthora capsici estExt_fgenesh1_kg.C_12090001 N 0.649
maker-pve_contig_1-fgenesh-gene-1.10 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.10 N 0.648
SPRG_05304 Saprolegnia parasitica SPRG_05304 N 0.520
estExt_fgenesh1_kg.C_40116 Phytophthora capsici estExt_fgenesh1_kg.C_40116 N 0.497
HpaG806488 Hyaloperonospora arabidopsidis HpaG806488 N 0.475
maker-pve_contig_1-fgenesh-gene-1.21 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.21 N 0.465
TsM_000115400 Taenia solium TsM_000115400 N 0.419
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.419