maker-pir_contig_878-fgenesh-gene-0.5 (Pythium irregulare)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-pir_contig_878-fgenesh-gene-0.5 T331152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000022168 Sox 34 103
EPrPI00000022168 Sox 120 188

Links

Other Sox family TFs
Other Pythium irregulare TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-piw_contig_2474-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_2474-fgenesh-gene-0.2 N 0.735
SPRG_08822 Saprolegnia parasitica SPRG_08822 N 0.729
Phyra84677 Phytophthora ramorum Phyra84677 N 0.726
estExt_fgenesh1_kg.C_50989 Phytophthora capsici estExt_fgenesh1_kg.C_50989 N 0.722
Physo142322 Phytophthora sojae Physo142322 N 0.721
PYU1_G009116 Pythium ultimum PYU1_G009116 N 0.721
HpaG804287 Hyaloperonospora arabidopsidis HpaG804287 N 0.721
F443_13786 Phytophthora parasitica F443_13786 N 0.721
fgenesh_scip_prom.46568.3800 Phytophthora kernoviae fgenesh_scip_prom.46568.3800 N 0.721
ALNC14_018350 Albugo laibachii ALNC14_018350 N 0.692
maker-pve_contig_787-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_787-fgenesh-gene-0.0 N 0.677
fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 Pythium aphanidermatum fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 N 0.671
maker-par_contig_1203-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_1203-snap-gene-0.8 N 0.655
estExt_Genewise1Plus.C_21097 Fragilariopsis cylindrus estExt_Genewise1Plus.C_21097 N 0.421