maker-pve_contig_787-fgenesh-gene-0.0 (Pythium vexans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-pve_contig_787-fgenesh-gene-0.0 T331164_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPV00000022088 Sox 36 105
EPrPV00000022088 Sox 122 190

Links

Other Sox family TFs
Other Pythium vexans TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PYU1_G009116 Pythium ultimum PYU1_G009116 N 0.698
estExt_fgenesh1_kg.C_50989 Phytophthora capsici estExt_fgenesh1_kg.C_50989 N 0.696
F443_13786 Phytophthora parasitica F443_13786 N 0.695
fgenesh_scip_prom.46568.3800 Phytophthora kernoviae fgenesh_scip_prom.46568.3800 N 0.695
Phyra84677 Phytophthora ramorum Phyra84677 N 0.693
Physo142322 Phytophthora sojae Physo142322 N 0.692
HpaG804287 Hyaloperonospora arabidopsidis HpaG804287 N 0.692
maker-pir_contig_878-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_878-fgenesh-gene-0.5 N 0.677
maker-par_contig_1203-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_1203-snap-gene-0.8 N 0.676
SPRG_08822 Saprolegnia parasitica SPRG_08822 N 0.673
maker-piw_contig_2474-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_2474-fgenesh-gene-0.2 N 0.671
fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 Pythium aphanidermatum fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 N 0.666
ALNC14_018350 Albugo laibachii ALNC14_018350 N 0.656
Phatr3_J6025 Phaeodactylum tricornutum Phatr3_J6025 N 0.448
estExt_Genewise1Plus.C_21097 Fragilariopsis cylindrus estExt_Genewise1Plus.C_21097 N 0.432