MLOC_57354 (Hordeum vulgare)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 MLOC_57354 T331312_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_57354.1 Sox 27 111

Links

Other Sox family TFs
Other Hordeum vulgare TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.674
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.674
BRADI5G18460 Brachypodium distachyon BRADI5G18460 N 0.584
F775_06533 Aegilops tauschii F775_06533 N 0.582
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N 0.582
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.522
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.516
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.510
OS04G0564600 Oryza sativa OS04G0564600 N 0.510
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.510
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.510
OB04G28810 Oryza brachyantha OB04G28810 N 0.510
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.510
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.510
OBART04G21800 Oryza barthii OBART04G21800 N 0.510
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.510
GRMZM2G145968 Zea mays GRMZM2G145968 N 0.500
Sb06g025440 Sorghum bicolor Sb06g025440 N 0.499
Si011290m.g Setaria italica Si011290m.g N 0.482
SELMODRAFT_38818 Selaginella moellendorffii SELMODRAFT_38818 I 0.469
SELMODRAFT_175895 Selaginella moellendorffii SELMODRAFT_175895 I 0.469
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I 0.465
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.440
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.440
SELMODRAFT_18312 Selaginella moellendorffii SELMODRAFT_18312 I 0.417
SELMODRAFT_18313 Selaginella moellendorffii SELMODRAFT_18313 I 0.417