CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_57360
(
Hordeum vulgare
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
MLOC_57360
T331313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_57360.1
Sox
213
277
RKKPAPAYILWCKDQWAEIKKSPDTDFKEVTNALGAKWKTLSNEEKQPYEERYRQEKEAYLQVVG
MLOC_57360.1
Sox
334
400
PKQPMSAYFLYSQERRGALVAEKKTVPEIGKITGEEWKGMTEAQKAPYEEAARKQKEAYQKQMEVYN
MLOC_57360.1
Sox
459
527
PKKPASSFLLFSKEARKQLAEERPGVNNSTLSALISVKWKDLSSAEKKVWSQKAAQGMAAYKMEMDEYT
MLOC_57360.2
Sox
154
218
RKKPAPAYILWCKDQWAEIKKSPDTDFKEVTNALGAKWKTLSNEEKQPYEERYRQEKEAYLQVVG
MLOC_57360.2
Sox
275
341
PKQPMSAYFLYSQERRGALVAEKKTVPEIGKITGEEWKGMTEAQKAPYEEAARKQKEAYQKQMEVYN
MLOC_57360.2
Sox
400
468
PKKPASSFLLFSKEARKQLAEERPGVNNSTLSALISVKWKDLSSAEKKVWSQKAAQGMAAYKMEMDEYT
MLOC_57360.3
Sox
62
114
CPRSFQIKKSPDTDFKEVTNALGAKWKTLSNEEKQPYEERYRQEKEAYLQVVG
MLOC_57360.3
Sox
171
237
PKQPMSAYFLYSQERRGALVAEKKTVPEIGKITGEEWKGMTEAQKAPYEEAARKQKEAYQKQMEVYN
MLOC_57360.3
Sox
296
364
PKKPASSFLLFSKEARKQLAEERPGVNNSTLSALISVKWKDLSSAEKKVWSQKAAQGMAAYKMEMDEYT
Links
Other
Sox
family TFs
Other
Hordeum vulgare
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy