NCAS_0A10110 (Naumovozyma castellii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 NCAS_0A10110 T331434_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP10
M00068_2.00
Saccharomyces cerevisiae
TCCCCGGC

GCCGGGGA
PBM
Badis et al.(2008)
NHP10_2069
0.556 0.646
NHP10
M07496_2.00
Saccharomyces cerevisiae
YCCCCGGY

RCCGGGGR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1
0.556 0.646
NHP10
M08604_2.00
Saccharomyces cerevisiae
TCCCCGGY

RCCGGGGA
Misc
DeBoer et al.(2011)
YDL002C_502
0.556 0.646
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC67569 Sox 102 166

Links

Other Sox family TFs
Other Naumovozyma castellii TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I 0.741
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I 0.660
KAFR_0F02510 Kazachstania africana KAFR_0F02510 I 0.599
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I 0.590
CAGL0M10505g Candida glabrata CAGL0M10505g I 0.583
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I 0.583
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I 0.568
NHP10 Saccharomyces cerevisiae YDL002C D 0.556
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.556
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I 0.556
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.556
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.556
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.523
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I 0.503
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I 0.503
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I 0.503
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I 0.500
G210_3517 Candida maltosa G210_3517 I 0.493
YALI0_D17996g Yarrowia lipolytica YALI0_D17996g N 0.472
CD36_81110 Candida dubliniensis CD36_81110 I 0.445
LELG_02079 Lodderomyces elongisporus LELG_02079 N 0.443
CTRG_02198 Candida tropicalis CTRG_02198 N 0.438
gwh1.8.1.855.1 Pichia stipitis gwh1.8.1.855.1 N 0.426
PICST_12709 Scheffersomyces stipitis PICST_12709 N 0.426