NCAS_0I01260 (Naumovozyma castellii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 NCAS_0I01260 T331441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN

NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.639 0.783
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN

NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.639 0.783
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN

NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.632 0.768
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN

NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.632 0.768
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC71794 Sox 22 90

Links

Other Sox family TFs
Other Naumovozyma castellii TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI4G14190 Brachypodium distachyon BRADI4G14190 N 0.000
GRMZM2G133675 Zea mays GRMZM2G133675 N 0.000
OB11G24570 Oryza brachyantha OB11G24570 N 0.000
ORGLA11G0160400 Oryza glaberrima ORGLA11G0160400 N 0.000
OS11G0601700 Oryza sativa OS11G0601700 N 0.000
Pavir.Ha00418 Panicum virgatum Pavir.Ha00418 N 0.000
Pavir.J36771 Panicum virgatum Pavir.J36771 N 0.000
Sb05g023730 Sorghum bicolor Sb05g023730 N 0.000