TF Information

NEMVEDRAFT_v1g120503 *(Nematostella vectensis)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00505 (HMG_box)	IPR000910	NEMVEDRAFT_v1g120503	T331464_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hbp1 M00194_2.00	Mus musculus	NNNDDNNN	NNNHHNNN	PBM Badis et al.(2009) Hbp1_2241	0.604	0.750
HBP1 M11299_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HBP1_Q2	0.604	0.750
Cic M00195_2.00	Mus musculus	NNTGCTGABN	NVTCAGCANN	PBM Badis et al.(2009) Cic_3454	0.470	0.456
cic M06452_2.00	Drosophila melanogaster	YYCATTSA	TSAATGRR	B1H Zhu et al.(2011) cic_SANGER_5_FBgn0028386	0.454	0.412
gei-3 M00711_2.00	Caenorhabditis elegans	NWNWMWDN	NHWKWNWN	PBM Narasimhan et al.(2015) pTH10038	0.437	0.456
ROX1 M00070_2.00	Saccharomyces cerevisiae	NRAACAATWNN	NNWATTGTTYN	PBM Badis et al.(2008) ROX1_2099	0.434	0.309
ROX1 M07498_2.00	Saccharomyces cerevisiae	YYHATTGTTYTS	SARAACAATDRR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0371.1	0.434	0.309
ROX1 M08607_2.00	Saccharomyces cerevisiae	BYATTGTN	NACAATRV	Misc DeBoer et al.(2011) YPR065W_1396	0.434	0.309
ROX1 M11346_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6_01	0.434	0.309
ROX1 M11347_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6	0.434	0.309
For this family, TFs with SR scores > 0.415* will likely have a similar motif*