CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NEMVEDRAFT_v1g207488
(
Nematostella vectensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
NEMVEDRAFT_v1g207488
T331476_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO40695
Sox
135
177
GEWYRQLSERGGERYRRLSERGGERYRRLSERGGERYRRLSER
EDO40695
Sox
172
211
RRLSERGGERYRRLSERGGERYRRLSERGGERYRRLSERG
EDO40695
Sox
260
307
LSERGGERYRRLSGRGGERYRRLSERGGERYRRLSERGGERYRRLSER
EDO40695
Sox
312
351
YRRLSERGGERYRRLSERGGERYRRLSERGGERYRRLSER
EDO40695
Sox
345
384
YRRLSERGGEWYRRLSERGGERYRRLSERGGERYRRLSER
EDO40695
Sox
356
396
YRRLSERGGERYRRLSERGGERYRRLSERGGERYRRLSERG
EDO40695
Sox
380
418
RLSERGGERYRRLSERGGERYRRLSERGGERYRRLSERG
EDO40695
Sox
422
461
YRRLSERGGERYRWLSEGGGERYRRLSERGGERYRRLSER
EDO40695
Sox
432
483
RYRWLSEGGGERYRRLSERGGERYRRLSERGGERYRRLSERRGERYRWLSEG
EDO40695
Sox
479
527
WLSEGGGEWYRRLSERGGEQYRRLSERRGERYRRLSEGGGEWYRRLSER
Links
Other
Sox
family TFs
Other
Nematostella vectensis
TFs
0 Related TFs
">No related TF found