CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB08G10120
(
Oryza brachyantha
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
OB08G10120
T331560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB08G10120.1
Sox
89
156
GKRPPTAFFLFLADFRKEYKAEHPGNKSVSAAAKEGGERWKAMSDEEKKPYLDKAAELKAEYDNGEHS
Links
Other
Sox
family TFs
Other
Oryza brachyantha
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM08G00090
Oryza glumaepatula
OGLUM08G00090
I
0.695
OBART08G00070
Oryza barthii
OBART08G00070
I
0.695
BGIOSGA027819
Oryza indica
BGIOSGA027819
I
0.695
ONIVA08G00070
Oryza nivara
ONIVA08G00070
I
0.695
OPUNC08G00150
Oryza punctata
OPUNC08G00150
I
0.695
OS08G0101100
Oryza sativa
OS08G0101100
I
0.695
ORUFI08G00080
Oryza rufipogon
ORUFI08G00080
I
0.695
BGIOSGA027814
Oryza indica
BGIOSGA027814
I
0.695
OLONG_014445
Oryza longistaminata
OLONG_014445
I
0.695
MDP0000205665
Malus domestica
MDP0000205665
I
0.621
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
0.615
Pm006054
Prunus mume
Pm006054
I
0.610
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
0.610
GRMZM2G125648
Zea mays
GRMZM2G125648
N
0.609
LPERR08G00140
Leersia perrieri
LPERR08G00140
N
0.602
orange1.1g026850m.g
Citrus sinensis
orange1.1g026850m.g
N
0.595
Ciclev10016587m.g
Citrus clementina
Ciclev10016587m.g
N
0.595
Sb07g000230
Sorghum bicolor
Sb07g000230
N
0.582
Pavir.J10680
Panicum virgatum
Pavir.J10680
N
0.580
PDK_20s1709771g002
Phoenix dactylifera
PDK_20s1709771g002
N
0.577
HMGB6
Populus trichocarpa
POPTR_0007s15320
I
0.577
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.567
TCM_007659
Theobroma cacao
TCM_007659
I
0.564
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.557
Si014434m.g
Setaria italica
Si014434m.g
N
0.550
evm.TU.supercontig_247.1
Carica papaya
evm.TU.supercontig_247.1
N
0.547
Bra029371
Brassica rapa
Bra029371
I
0.545
Bo2g160920
Brassica oleracea
Bo2g160920
I
0.545
fgenesh2_kg.6__1935__AT5G23420.1
Arabidopsis lyrata
fgenesh2_kg.6__1935__AT5G23420.1
N
0.542
PDK_20s1355261g001
Phoenix dactylifera
PDK_20s1355261g001
N
0.539
PK03866.1
Cannabis sativa
PK03866.1
I
0.533
PGSC0003DMG400025304
Solanum tuberosum
PGSC0003DMG400025304
I
0.527
Cla009222
Citrullus lanatus
Cla009222
I
0.527
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
0.527
Thhalv10004817m.g
Eutrema salsugineum
Thhalv10004817m.g
N
0.519
30131.m007272
Ricinus communis
30131.m007272
I
0.514
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
0.506
OESDEN_24828
Oesophagostomum dentatum
OESDEN_24828
N
0.501
Carubv10001858m.g
Capsella rubella
Carubv10001858m.g
I
0.491
Cagra.0086s0060
Capsella grandiflora
Cagra.0086s0060
I
0.491
Eucgr.J00336
Eucalyptus grandis
Eucgr.J00336
I
0.489
Traes_7AL_959534EDB
Triticum aestivum
Traes_7AL_959534EDB
I
0.488
Traes_7DL_824BFE90C
Triticum aestivum
Traes_7DL_824BFE90C
I
0.488
TRIUR3_35367
Triticum urartu
TRIUR3_35367
I
0.488
Traes_7BL_871FCAF2F
Triticum aestivum
Traes_7BL_871FCAF2F
I
0.488
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
0.486
MLOC_77667
Hordeum vulgare
MLOC_77667
I
0.485
Aquca_035_00040
Aquilegia coerulea
Aquca_035_00040
I
0.482
Bra026498
Brassica rapa
Bra026498
I
0.481
Bo9g014140
Brassica oleracea
Bo9g014140
I
0.481
scaffold_602413.1
Arabidopsis lyrata
scaffold_602413.1
N
0.480
Lus10040192.g
Linum usitatissimum
Lus10040192.g
I
0.480
HMGB7
Arabidopsis thaliana
AT5G23420
N
0.480
TCM_042534
Theobroma cacao
TCM_042534
I
0.476
Lus10041009.g
Linum usitatissimum
Lus10041009.g
N
0.475
AMTR_s00171p00070550
Amborella trichopoda
AMTR_s00171p00070550
I
0.475
evm.TU.supercontig_19.183
Carica papaya
evm.TU.supercontig_19.183
I
0.470
BRADI3G12920
Brachypodium distachyon
BRADI3G12920
I
0.469
Lus10028298.g
Linum usitatissimum
Lus10028298.g
I
0.466
GRMZM2G162284
Zea mays
GRMZM2G162284
I
0.465
GSMUA_AchrUn_randomG05290_001
Musa acuminata
GSMUA_AchrUn_randomG05290_001
I
0.465
Bostr.10199s0131
Boechera stricta
Bostr.10199s0131
N
0.464
SNAPOd2T00000181001
Oikopleura dioica
SNAPOd2T00000181001
N
0.463
Aquca_004_00335
Aquilegia coerulea
Aquca_004_00335
I
0.454
Pavir.Fb00026
Panicum virgatum
Pavir.Fb00026
N
0.453
Aquca_015_00344
Aquilegia coerulea
Aquca_015_00344
I
0.453
mgf009124m
Mimulus guttatus
mgf009124m
N
0.452
ENSOGAG00000034481
Otolemur garnettii
ENSOGAG00000034481
N
0.451
GF12460
Drosophila ananassae
FBgn0089497
N
0.447
GD25013
Drosophila simulans
FBgn0196325
N
0.447
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.447
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.445
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.445
fgenesh1_pg.4_#_114
Coccomyxa subellipsoidea C169
fgenesh1_pg.4_#_114
N
0.445
fgeneshCV_pg.C_scaffold_4000123
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_4000123
N
0.445
HMEL015307
Heliconius melpomene
HMEL015307
N
0.443
SapurV1A.0085s0030
Salix purpurea
SapurV1A.0085s0030
I
0.443
POPTR_0005s10440
Populus trichocarpa
POPTR_0005s10440
I
0.443
Pm026798
Prunus mume
Pm026798
I
0.442
Bo8g070350
Brassica oleracea
Bo8g070350
I
0.442
Bo7g061420
Brassica oleracea
Bo7g061420
I
0.442
Bostr.7128s0662
Boechera stricta
Bostr.7128s0662
I
0.442
PRUPE_ppa012972mg
Prunus persica
PRUPE_ppa012972mg
I
0.442
Carubv10012681m.g
Capsella rubella
Carubv10012681m.g
I
0.442
GJ21774
Drosophila virilis
FBgn0208892
N
0.442
MDOA007633
Musca domestica
MDOA007633
N
0.442
GE11532
Drosophila yakuba
FBgn0229332
N
0.442
Cagra.6160s0027
Capsella grandiflora
Cagra.6160s0027
I
0.442
HMGB3
Arabidopsis thaliana
AT1G20696
I
0.442
GG19998
Drosophila erecta
FBgn0112197
N
0.442
HMGB3
Arabidopsis lyrata
fgenesh2_kg.1__2258__AT1G20696.3
I
0.442
SapurV1A.0016s0600
Salix purpurea
SapurV1A.0016s0600
I
0.442
PRUPE_ppa011596mg
Prunus persica
PRUPE_ppa011596mg
I
0.442
GH21151
Drosophila grimshawi
FBgn0128613
N
0.441
AAEL002381
Aedes aegypti
AAEL002381
N
0.440
GLYMA10G43440
Glycine max
GLYMA10G43440
I
0.438
29669.m000844
Ricinus communis
29669.m000844
I
0.438
GLYMA20G23370
Glycine max
GLYMA20G23370
I
0.438
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.438
chr5.CM0180.220.nd
Lotus japonicus
chr5.CM0180.220.nd
I
0.438
mgf009330m
Mimulus guttatus
mgf009330m
I
0.437
Eucgr.J02535
Eucalyptus grandis
Eucgr.J02535
I
0.437
PGSC0003DMG400018685
Solanum tuberosum
PGSC0003DMG400018685
I
0.437
HCOI01912600
Haemonchus contortus
HCOI01912600
I
0.437
Bra025838
Brassica rapa
Bra025838
I
0.437
HCOI01913300
Haemonchus contortus
HCOI01913300
I
0.437
Aquca_045_00054
Aquilegia coerulea
Aquca_045_00054
I
0.436
PDK_20s1306741g001
Phoenix dactylifera
PDK_20s1306741g001
I
0.436
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.435
PK14705.1
Cannabis sativa
PK14705.1
I
0.431
PRUPE_ppa012424mg
Prunus persica
PRUPE_ppa012424mg
I
0.430
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.430
MDP0000757111
Malus domestica
MDP0000757111
I
0.430
MDP0000362980
Malus domestica
MDP0000362980
I
0.430
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.430
KGM_13851
Danaus plexippus
KGM_13851
N
0.430
Pm018913
Prunus mume
Pm018913
I
0.430
SPRG_10438
Saprolegnia parasitica
SPRG_10438
N
0.429
MDP0000607529
Malus domestica
MDP0000607529
I
0.427
Pavir.Ba01379
Panicum virgatum
Pavir.Ba01379
I
0.425
Pavir.Bb02550
Panicum virgatum
Pavir.Bb02550
I
0.425
Traes_5DL_DD9491112
Triticum aestivum
Traes_5DL_DD9491112
I
0.425
Traes_5BL_9CC98DD38
Triticum aestivum
Traes_5BL_9CC98DD38
I
0.425
mgf016608m
Mimulus guttatus
mgf016608m
I
0.425
TRIUR3_27273
Triticum urartu
TRIUR3_27273
I
0.425
VIT_04s0044g00110
Vitis vinifera
VIT_04s0044g00110
I
0.425
VIT_18s0122g01190
Vitis vinifera
VIT_18s0122g01190
I
0.425
Sb02g032140
Sorghum bicolor
Sb02g032140
I
0.425
OB09G25530
Oryza brachyantha
OB09G25530
I
0.425
BRADI4G37247
Brachypodium distachyon
BRADI4G37247
I
0.425
GRMZM2G066528
Zea mays
GRMZM2G066528
I
0.425
LPERR09G14820
Leersia perrieri
LPERR09G14820
I
0.425
MTR_8g073345
Medicago truncatula
MTR_8g073345
I
0.425
Ca_09896
Cicer arietinum
Ca_09896
I
0.425
Si031512m.g
Setaria italica
Si031512m.g
I
0.425
mgf008076m
Mimulus guttatus
mgf008076m
I
0.425
mgf006113m
Mimulus guttatus
mgf006113m
I
0.425
mgf000913m
Mimulus guttatus
mgf000913m
I
0.424
Lus10012252.g
Linum usitatissimum
Lus10012252.g
I
0.424
mgf014518m
Mimulus guttatus
mgf014518m
I
0.424
Lus10016025.g
Linum usitatissimum
Lus10016025.g
I
0.424
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.423
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.423
BGIOSGA023639
Oryza indica
BGIOSGA023639
I
0.423
TCM_000068
Theobroma cacao
TCM_000068
I
0.422
GSMUA_Achr4G25860_001
Musa acuminata
GSMUA_Achr4G25860_001
I
0.421
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.421
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.420
SELMODRAFT_18312
Selaginella moellendorffii
SELMODRAFT_18312
I
0.420
SELMODRAFT_18313
Selaginella moellendorffii
SELMODRAFT_18313
I
0.420
Cucsa.323100
Cucumis sativus
Cucsa.323100
I
0.419
Cla009093
Citrullus lanatus
Cla009093
I
0.419
cassava24859.valid.m1
Manihot esculenta
cassava24859.valid.m1
I
0.419
Ca_05351
Cicer arietinum
Ca_05351
I
0.419
OS09G0551600
Oryza sativa
OS09G0551600
I
0.418
OMERI09G14100
Oryza meridionalis
OMERI09G14100
I
0.418
ORUFI09G20440
Oryza rufipogon
ORUFI09G20440
I
0.418
ONIVA09G20030
Oryza nivara
ONIVA09G20030
I
0.418
ORGLA09G0150800
Oryza glaberrima
ORGLA09G0150800
I
0.418
SELMODRAFT_38818
Selaginella moellendorffii
SELMODRAFT_38818
I
0.417
SELMODRAFT_175895
Selaginella moellendorffii
SELMODRAFT_175895
I
0.417
ACEP16621
Atta cephalotes
ACEP16621
N
0.416
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.416
LjT35D08.150.nd
Lotus japonicus
LjT35D08.150.nd
I
0.415
MTR_7g068280
Medicago truncatula
MTR_7g068280
I
0.415