CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM09G19410
(
Oryza glumaepatula
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
OGLUM09G19410
T331599_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM09G19410.1
Sox
28
74
PKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAI
OGLUM09G19410.1
Sox
80
109
VAVPCKDKAPFVTKAEKLKAEYTKKIDAYN
OGLUM09G19410.2
Sox
28
74
PKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAI
OGLUM09G19410.2
Sox
80
109
VAVPCKDKAPFVTKAEKLKAEYTKKIDAYN
Links
Other
Sox
family TFs
Other
Oryza glumaepatula
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy