OLONG_000335 (Oryza longistaminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OLONG_000335 T331612_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_000335-R1 Sox 21 79

Links

Other Sox family TFs
Other Oryza longistaminata TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G013821 Zea mays GRMZM2G013821 N 0.724
GRMZM2G156785 Zea mays GRMZM2G156785 N 0.660
ONIVA02G29880 Oryza nivara ONIVA02G29880 N 0.505
OMERI02G26620 Oryza meridionalis OMERI02G26620 N 0.505
OPUNC02G25020 Oryza punctata OPUNC02G25020 N 0.505
ORUFI02G28820 Oryza rufipogon ORUFI02G28820 N 0.505
BGIOSGA008782 Oryza indica BGIOSGA008782 N 0.505
OGLUM02G27900 Oryza glumaepatula OGLUM02G27900 N 0.505
OS02G0670400 Oryza sativa OS02G0670400 N 0.505
OBART02G27340 Oryza barthii OBART02G27340 N 0.505
OB02G34710 Oryza brachyantha OB02G34710 N 0.505
BRADI3G51140 Brachypodium distachyon BRADI3G51140 N 0.501
LPERR02G22240 Leersia perrieri LPERR02G22240 N 0.493
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.490
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.490
Si018635m.g Setaria italica Si018635m.g N 0.486
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.474
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.474
Pavir.J38684 Panicum virgatum Pavir.J38684 N 0.463
Pavir.J40489 Panicum virgatum Pavir.J40489 N 0.463
Sb04g032180 Sorghum bicolor Sb04g032180 N 0.455
MDP0000242568 Malus domestica MDP0000242568 I 0.452
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.451
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.445
F775_30706 Aegilops tauschii F775_30706 I 0.436
Traes_6DL_E5B5F44FC Triticum aestivum Traes_6DL_E5B5F44FC I 0.436
Traes_6AL_9EC9874F1 Triticum aestivum Traes_6AL_9EC9874F1 I 0.436
TRIUR3_34670 Triticum urartu TRIUR3_34670 I 0.436
Traes_6BL_017F7FCF8 Triticum aestivum Traes_6BL_017F7FCF8 I 0.436
TRIUR3_17303 Triticum urartu TRIUR3_17303 N 0.436
TELCIR_05563 Teladorsagia circumcincta TELCIR_05563 N 0.428
GSMUA_Achr5G11630_001 Musa acuminata GSMUA_Achr5G11630_001 I 0.426
HelroG183541 Helobdella robusta HelroG183541 N 0.423