OLONG_013579 (Oryza longistaminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OLONG_013579 T331618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_013579-R1 Sox 1 38

Links

Other Sox family TFs
Other Oryza longistaminata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_17303 Triticum urartu TRIUR3_17303 N 0.565
fgenesh2_pg.scaffold_535000011 Branchiostoma floridae fgenesh2_pg.scaffold_535000011 N 0.507
F775_24487 Aegilops tauschii F775_24487 N 0.500
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.499
Traes_5DL_BCFE39D13 Triticum aestivum Traes_5DL_BCFE39D13 N 0.496
SMU15010330 Schmidtea mediterranea SMU15010330 N 0.466
PTTG_03070 Puccinia triticina PTTG_03070 N 0.461
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.460
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.460
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.460
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.460
OS04G0564600 Oryza sativa OS04G0564600 N 0.460
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.460
OB04G28810 Oryza brachyantha OB04G28810 N 0.460
OBART04G21800 Oryza barthii OBART04G21800 N 0.460
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.460
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.458
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.455
Sakowv30045438m.g Saccoglossus kowalevskii Sakowv30045438m.g N 0.454
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.454
HMG20A Homo sapiens ENSG00000140382 I 0.451
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N 0.451
GH17483 Drosophila grimshawi FBgn0124953 N 0.448
M422DRAFT_50085 Sphaerobolus stellatus M422DRAFT_50085 N 0.447
DAPPUDRAFT_336128 Daphnia pulex DAPPUDRAFT_336128 N 0.445
Ca_14341 Cicer arietinum Ca_14341 N 0.440
SMU15030327 Schmidtea mediterranea SMU15030327 N 0.438
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.437
CGOC_0001370301 Cylicostephanus goldi CGOC_0001370301 N 0.431
cassava14282.m1 Manihot esculenta cassava14282.m1 N 0.428
PPA22145 Pristionchus pacificus PPA22145 N 0.426
TRIUR3_05701 Triticum urartu TRIUR3_05701 N 0.424
GLOINDRAFT_16424 Rhizophagus irregularis GLOINDRAFT_16424 N 0.419
SERLA73DRAFT_158240 Serpula lacrymans SERLA73DRAFT_158240 N 0.418