OLONG_023518 (Oryza longistaminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OLONG_023518 T331624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_023518-R1 Sox 566 634

Links

Other Sox family TFs
Other Oryza longistaminata TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.741
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.741
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.741
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.741
OBART01G05540 Oryza barthii OBART01G05540 N 0.741
SSRP1-A Oryza sativa OS01G0184900 N 0.741
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.741
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.741
OB01G15440 Oryza brachyantha OB01G15440 N 0.735
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.731
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.730
Si000646m.g Setaria italica Si000646m.g N 0.730
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.730
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.730
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.730
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.690
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.690
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.637
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.637
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.637
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.637
SSRP1-B Oryza sativa OS05G0182600 N 0.637
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.637
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.637
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.637
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.637
OBART05G05520 Oryza barthii OBART05G05520 N 0.637
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.637
OB05G15230 Oryza brachyantha OB05G15230 N 0.637
F775_29723 Aegilops tauschii F775_29723 I 0.631
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.631
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.631
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.631
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.621
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.614
Sb09g005650 Sorghum bicolor Sb09g005650 N 0.599
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.599
Si021575m.g Setaria italica Si021575m.g N 0.593
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.593
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.593
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.592
Si024096m.g Setaria italica Si024096m.g N 0.583
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.581
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.581
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.581
F775_28104 Aegilops tauschii F775_28104 N 0.581
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.563
mgf024995m Mimulus guttatus mgf024995m I 0.459
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.455
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.455
Chro.20230 Cryptosporidium hominis Chro.20230 N 0.447
cgd2_2120 Cryptosporidium parvum cgd2_2120 N 0.447
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.446
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.438
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.438
BRADI2G05430 Brachypodium distachyon BRADI2G05430 N 0.435
AAEL011425 Aedes aegypti AAEL011425 I 0.431
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.422
PV08_04655 Exophiala spinifera PV08_04655 I 0.417
PV06_04154 Exophiala oligosperma PV06_04154 I 0.417
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.417
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.417
A1O1_01197 Capronia coronata A1O1_01197 I 0.417
PV11_09703 Exophiala sideris PV11_09703 I 0.417
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.417
A1O3_08778 Capronia epimyces A1O3_08778 I 0.417
G647_10093 Cladophialophora carrionii G647_10093 I 0.417
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.417
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.417