OS04G0564600 (Oryza sativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OS04G0564600 T331711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OS04T0564600-01 Sox 25 81
OS04T0564600-02 Sox 25 78

Links

Other Sox family TFs
Other Oryza sativa TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.741
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.741
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.741
OB04G28810 Oryza brachyantha OB04G28810 N 0.741
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.741
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.741
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.741
OBART04G21800 Oryza barthii OBART04G21800 N 0.741
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.735
F775_06533 Aegilops tauschii F775_06533 N 0.631
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N 0.631
BRADI5G18460 Brachypodium distachyon BRADI5G18460 N 0.609
Si011290m.g Setaria italica Si011290m.g N 0.568
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.540
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.540
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.539
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.523
TCM_042534 Theobroma cacao TCM_042534 I 0.518
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.515
MLOC_57354 Hordeum vulgare MLOC_57354 N 0.510
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.505
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.502
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.495
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.488
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.484
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.477
PK14705.1 Cannabis sativa PK14705.1 I 0.475
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.471
Hsal_18129--FBpp0074818_DROME Harpegnathos saltator Hsal_18129--FBpp0074818_DROME N 0.468
OLONG_013579 Oryza longistaminata OLONG_013579 N 0.460
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.459
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.450
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.450
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.450
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.450
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.450
SVUK_0000188101 Strongylus vulgaris SVUK_0000188101 N 0.445
ANCCAN_02453 Ancylostoma caninum ANCCAN_02453 N 0.445
Si007288m.g Setaria italica Si007288m.g I 0.443
MLOC_77667 Hordeum vulgare MLOC_77667 I 0.440
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.439
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.439
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I 0.437
TRIUR3_35367 Triticum urartu TRIUR3_35367 I 0.437
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I 0.437
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I 0.437
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.436
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.435
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.435
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.428
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.428
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.428
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.428
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.428
GRMZM2G145968 Zea mays GRMZM2G145968 N 0.428
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.427
bbx Danio rerio ENSDARG00000012699 I 0.427
ENSSSCG00000025539 Sus scrofa ENSSSCG00000025539 I 0.427
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.420
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.420
OBART08G00070 Oryza barthii OBART08G00070 I 0.420
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.420
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.420
OS08G0101100 Oryza sativa OS08G0101100 I 0.420
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.420
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.420
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.420
Si014434m.g Setaria italica Si014434m.g N 0.418
Sb06g025440 Sorghum bicolor Sb06g025440 N 0.417
TELCIR_05566 Teladorsagia circumcincta TELCIR_05566 N 0.415
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.415