OS09G0551600 (Oryza sativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OS09G0551600 T331716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HMG-1
M02720_2.00
Pisum sativum
STYGTDHTY

RADHACRAS
SELEX
Mathelier et al.(2014)
MA0044.1
0.607 0.652
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS09T0551600-01 Sox 28 97

Links

Other Sox family TFs
Other Oryza sativa TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_078050 Aspergillus clavatus CADACLAG00007361 I 0.000
ANIA_03217 Aspergillus nidulans CADANIAG00009845 D 0.000
CADAFLAG00001834 Aspergillus flavus CADAFLAG00001834 N 0.000
CADANGAG00013817 Aspergillus niger CADANGAG00013817 I 0.000
CADAORAG00001901 Aspergillus oryzae CADAORAG00001901 N 0.000
EURHEDRAFT_517185 Aspergillus ruber EURHEDRAFT_517185 I 0.000
F503_06786 Ophiostoma piceae uamh F503_06786 I 0.000
fgenesh1_pm.00129_#_507 Aspergillus carbonarius fgenesh1_pm.00129_#_507 I 0.000
fgenesh1_pm.sca_6_chr9_2_0000348 Nectria haematococca fgenesh1_pm.sca_6_chr9_2_0000348 I 0.000
FOXG_17198 Fusarium oxysporum FOXG_17198 I 0.000
NechaG96390 Fusarium solani NechaG96390 I 0.000
NFIA_044490 Neosartorya fischeri CADNFIAG00003969 I 0.000
Pc12g13570 Penicillium chrysogenum Pc12g13570 N 0.000
PCH_Pc12g13570 Penicillium rubens PCH_Pc12g13570 N 0.000
PDE_01258 Penicillium oxalicum PDE_01258 I 0.000
PDIP_77870 Penicillium digitatum PDIP_77870 N 0.000