OSTLU_19125 (Ostreococcus lucimarinus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OSTLU_19125 T331722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ABP01082 Sox 465 532

Links

Other Sox family TFs
Other Ostreococcus lucimarinus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OSTLU_15773 Ostreococcus lucimarinus OSTLU_15773 N 0.500
e_gw1.6.1001.1 Ostreococcus RCC809 e_gw1.6.1001.1 N 0.466
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.456
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N 0.454
GUITHDRAFT_76406 Guillardia theta GUITHDRAFT_76406 N 0.452
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N 0.452
GUITHDRAFT_114564 Guillardia theta GUITHDRAFT_114564 N 0.452
CHLREDRAFT_189879 Chlamydomonas reinhardtii CHLREDRAFT_189879 N 0.435
GUITHDRAFT_115609 Guillardia theta GUITHDRAFT_115609 N 0.431
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N 0.429
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.427
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.427
OS01G0666200 Oryza sativa OS01G0666200 N 0.423
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.423
OBART01G25720 Oryza barthii OBART01G25720 N 0.423
OB01G34910 Oryza brachyantha OB01G34910 I 0.423
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.423
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.423
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.423
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.423
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.421