PFL1_06779 (Pseudozyma flocculosa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PFL1_06779 T331837_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPQ25642 Sox 179 250

Links

Other Sox family TFs
Other Pseudozyma flocculosa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30076.m004659 Ricinus communis 30076.m004659 I 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.000
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.000
Aquca_013_00256 Aquilegia coerulea Aquca_013_00256 N 0.000
Aquca_019_00025 Aquilegia coerulea Aquca_019_00025 N 0.000
Aquca_024_00025 Aquilegia coerulea Aquca_024_00025 N 0.000
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.000
Aquca_031_00048 Aquilegia coerulea Aquca_031_00048 N 0.000
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.000
BGIOSGA019116 Oryza indica BGIOSGA019116 N 0.000
BGIOSGA019118 Oryza indica BGIOSGA019118 I 0.000
Bo6g079450 Brassica oleracea Bo6g079450 I 0.000
Bo8g097830 Brassica oleracea Bo8g097830 I 0.000
Bra003500 Brassica rapa Bra003500 I 0.000
Bra007679 Brassica rapa Bra007679 I 0.000
Bra039631 Brassica rapa Bra039631 I 0.000
BRADI2G38380 Brachypodium distachyon BRADI2G38380 N 0.000
BZIP53 Arabidopsis thaliana AT3G62420 D 0.000
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.000
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.000
cassava1498.valid.m1 Manihot esculenta cassava1498.valid.m1 N 0.000
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.000
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava42526.valid.m1 Manihot esculenta cassava42526.valid.m1 N 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
Ca_09362 Cicer arietinum Ca_09362 I 0.000
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla022814 Citrullus lanatus Cla022814 N 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
Cucsa.248080 Cucumis sativus Cucsa.248080 N 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.000
Gorai.012G155000 Gossypium raimondii Gorai.012G155000 N 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.000
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.000
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.000
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
MDP0000183562 Malus domestica MDP0000183562 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
MDP0000891108 Malus domestica MDP0000891108 I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
MLOC_52125 Hordeum vulgare MLOC_52125 N 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
OB05G12090 Oryza brachyantha OB05G12090 N 0.000
OBART05G02070 Oryza barthii OBART05G02070 N 0.000
OGLUM05G02130 Oryza glumaepatula OGLUM05G02130 N 0.000
OMERI05G02170 Oryza meridionalis OMERI05G02170 N 0.000
ONIVA05G02010 Oryza nivara ONIVA05G02010 I 0.000
OPUNC05G01750 Oryza punctata OPUNC05G01750 N 0.000
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
ORGLA05G0020300 Oryza glaberrima ORGLA05G0020300 N 0.000
ORUFI05G02170 Oryza rufipogon ORUFI05G02170 N 0.000
OS05G0129300 Oryza sativa OS05G0129300 N 0.000
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.000
Pavir.J06041 Panicum virgatum Pavir.J06041 N 0.000
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.000
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.000
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.000
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.000
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.000
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.000
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.000
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.000
Si023562m.g Setaria italica Si023562m.g N 0.000
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.000
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.000
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.000
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.000
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.000
Traes_1AS_94B6230FB1 Triticum aestivum Traes_1AS_94B6230FB1 N 0.000
Traes_1BS_A44C97E0F Triticum aestivum Traes_1BS_A44C97E0F N 0.000
Traes_1DS_62FDD3493 Triticum aestivum Traes_1DS_62FDD3493 N 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.000