PGSC0003DMG400016690 (Solanum tuberosum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 PGSC0003DMG400016690 T331851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400043035 DM 47 88
PGSC0003DMT400043036 Sox 57 126
PGSC0003DMT400043037 Sox 57 126
PGSC0003DMT400043038 Sox 57 126

Links

Other Sox family TFs
Other Solanum tuberosum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g043600.1 Solanum lycopersicum Solyc03g043600.1 N 0.741
SapurV1A.0230s0030 Salix purpurea SapurV1A.0230s0030 N 0.638
SapurV1A.0728s0020 Salix purpurea SapurV1A.0728s0020 N 0.638
evm.TU.supercontig_116.14 Carica papaya evm.TU.supercontig_116.14 N 0.638
28748.m000216 Ricinus communis 28748.m000216 N 0.638
PRUPE_ppa003531mg Prunus persica PRUPE_ppa003531mg N 0.637
Pm014490 Prunus mume Pm014490 N 0.637
orange1.1g043878m.g Citrus sinensis orange1.1g043878m.g N 0.629
Ciclev10011294m.g Citrus clementina Ciclev10011294m.g N 0.629
VIT_14s0006g01840 Vitis vinifera VIT_14s0006g01840 N 0.628
PK10571.1 Cannabis sativa PK10571.1 N 0.609
TCM_045462 Theobroma cacao TCM_045462 N 0.608
MDP0000237182 Malus domestica MDP0000237182 N 0.606
Gorai.010G218300 Gossypium raimondii Gorai.010G218300 N 0.599
POPTR_0004s09080 Populus trichocarpa POPTR_0004s09080 N 0.592
GLYMA10G34561 Glycine max GLYMA10G34561 N 0.470