CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHACADRAFT_250106
(
Phanerochaete carnosa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PHACADRAFT_250106
T331890_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKM59539
Sox
99
167
PKRPPSSYLLFQNEVRQELKAKHPNIPNNELLAKIAKAWGDMPKEQKDRYESRHAVSKNHYLEQKKEYE
Links
Other
Sox
family TFs
Other
Phanerochaete carnosa
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.699
PHLGIDRAFT_91671
Phlebiopsis gigantea
PHLGIDRAFT_91671
N
0.637
FOMPIDRAFT_1116461
Fomitopsis pinicola
FOMPIDRAFT_1116461
N
0.606
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.587
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.582
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.574
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.560
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.553
CERSUDRAFT_111715
Ceriporiopsis subvermispora
CERSUDRAFT_111715
N
0.552
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.550
FIBRA_06118
Fibroporia radiculosa
FIBRA_06118
N
0.528
GLOTRDRAFT_119701
Gloeophyllum trabeum
GLOTRDRAFT_119701
N
0.525
BN946_scf185043.g242
Trametes cinnabarina
BN946_scf185043.g242
N
0.524
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.514
LACBIDRAFT_294914
Laccaria bicolor
LACBIDRAFT_294914
N
0.508
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.500
estExt_fgenesh3_kg.C_40392
Heterobasidion annosum
estExt_fgenesh3_kg.C_40392
N
0.500
POSPLDRAFT_104147
Postia placenta
POSPLDRAFT_104147
N
0.489
JAAARDRAFT_96982
Jaapia argillacea
JAAARDRAFT_96982
N
0.478
M407DRAFT_143647
Tulasnella calospora
M407DRAFT_143647
N
0.450
PLEOSDRAFT_1102853
Pleurotus ostreatus
PLEOSDRAFT_1102853
N
0.449
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.437
DACRYDRAFT_44392
Dacryopinax sp
DACRYDRAFT_44392
N
0.437
UM06160
Ustilago maydis
UM06160
N
0.436
PaG_06234
Pseudozyma aphidis
PaG_06234
N
0.436
UHOR_08733
Ustilago hordei
UHOR_08733
N
0.436
sr11268
Sporisorium reilianum
sr11268
N
0.436
PSEUBRA_SCAF25g00980
Pseudozyma brasiliensis
PSEUBRA_SCAF25g00980
N
0.436
PAN0_019d5853
Pseudozyma antarctica
PAN0_019d5853
N
0.436
PHSY_002600
Pseudozyma hubeiensis
PHSY_002600
N
0.430
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.422
HelroG82753
Helobdella robusta
HelroG82753
N
0.419