Phatr3_J12674 (Phaeodactylum tricornutum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phatr3_J12674 T331906_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J12674.p1 Sox 12 80
Phatr3_J12674.p1 Sox 113 181
Phatr3_J12674.p1 Sox 212 280

Links

Other Sox family TFs
Other Phaeodactylum tricornutum TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.1.1250.1 Fragilariopsis cylindrus e_gw1.1.1250.1 N 0.425