Phatr3_J39880 (Phaeodactylum tricornutum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phatr3_J39880 T331915_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J39880.p1 Sox 39 119

Links

Other Sox family TFs
Other Phaeodactylum tricornutum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J34626 Phaeodactylum tricornutum Phatr3_J34626 N 0.741
Phatr3_J45662 Phaeodactylum tricornutum Phatr3_J45662 I 0.632
Phatr3_EG02634 Phaeodactylum tricornutum Phatr3_EG02634 N 0.557
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.470
POPTR_0017s11460 Populus trichocarpa POPTR_0017s11460 I 0.463
SapurV1A.0447s0140 Salix purpurea SapurV1A.0447s0140 I 0.463
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.462
Phatr3_J43419 Phaeodactylum tricornutum Phatr3_J43419 N 0.456
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.445
MBR_01483 Metarhizium brunneum MBR_01483 I 0.443
MGU_02157 Metarhizium guizhouense MGU_02157 I 0.443
MAJ_04030 Metarhizium majus MAJ_04030 I 0.443
gw1.21.309.1 Fragilariopsis cylindrus gw1.21.309.1 N 0.439
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.439
Phatr3_J11888 Phaeodactylum tricornutum Phatr3_J11888 I 0.439
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.433
MBM_02410 Marssonina brunnea MBM_02410 I 0.433
M7I_1578 Glarea lozoyensis M7I_1578 I 0.433
G647_10093 Cladophialophora carrionii G647_10093 I 0.433
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.433
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.433
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.433
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.433
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I 0.423
1400010135 Ostreococcus tauri 1400010135 I 0.418
gw1.30.62.1 Fragilariopsis cylindrus gw1.30.62.1 N 0.416