Phatr3_J49506 (Phaeodactylum tricornutum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phatr3_J49506 T331928_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J49506.p1 Sox 77 111
Phatr3_J49506.p1 Sox 128 180

Links

Other Sox family TFs
Other Phaeodactylum tricornutum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.490
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.488
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.474
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.462
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.456
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.454
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.454
fgenesh2_pg.7_#_214 Fragilariopsis cylindrus fgenesh2_pg.7_#_214 N 0.448
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.445
Phatr3_J50336 Phaeodactylum tricornutum Phatr3_J50336 N 0.443
Phatr3_J49937 Phaeodactylum tricornutum Phatr3_J49937 N 0.440
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.437
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.434
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.423
fgenesh2_pg.9_#_75 Fragilariopsis cylindrus fgenesh2_pg.9_#_75 N 0.421
Thaps22372 Thalassiosira pseudonana Thaps22372 N 0.419
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.418
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.418
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.418