Phatr3_J8737 (Phaeodactylum tricornutum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phatr3_J8737 T331936_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J8737.p1 Sox 548 616

Links

Other Sox family TFs
Other Phaeodactylum tricornutum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP19638 Atta cephalotes ACEP19638 I 0.418
orange1.1g044275m.g Citrus sinensis orange1.1g044275m.g I 0.419
KUCA_T00005075001 Kuraishia capsulata KUCA_T00005075001 N 0.438
fgeneshHS_pg.scaffold_31000097 Naegleria gruberi fgeneshHS_pg.scaffold_31000097 N 0.463
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.433
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.430