Phyra74523 (Phytophthora ramorum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phyra74523 T331988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra74523 Sox 204 249

Links

Other Sox family TFs
Other Phytophthora ramorum TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I 0.541
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I 0.535
SINV12391 Solenopsis invicta SINV12391 I 0.535
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I 0.535
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I 0.541
GB50764 Apis mellifera GB50764 I 0.541
GH18160 Drosophila grimshawi FBgn0125628 I 0.490
GK13574 Drosophila willistoni FBgn0215582 I 0.490
GE25578 Drosophila yakuba FBgn0242642 I 0.490
KGM_20190 Danaus plexippus KGM_20190 I 0.571
CapteG224864 Capitella teleta CapteG224864 I 0.578
MCINX012524 Melitaea cinxia MCINX012524 I 0.600
NV13812 Nasonia vitripennis NV13812 I 0.571
ACEP12759 Atta cephalotes ACEP12759 I 0.535
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I 0.553
tetur18g00680 Tetranychus urticae tetur18g00680 I 0.571
MDOA001488 Musca domestica MDOA001488 I 0.571
HHAL005242-PA Halyomorpha halys HHAL005242-PA I 0.571
AQUA009805 Anopheles quadriannulatus AQUA009805 N 0.554
AMEM002948 Anopheles merus AMEM002948 N 0.554
AMIN003838 Anopheles minimus AMIN003838 N 0.554
AMEC005071 Anopheles melas AMEC005071 N 0.554
AMAM021723 Anopheles maculatus AMAM021723 N 0.509
AFUN011346 Anopheles funestus AFUN011346 N 0.554
Minc12734 Meloidogyne incognita Minc12734 N 0.535
AALB007196 Anopheles albimanus AALB007196 N 0.586
AARA009694 Anopheles arabiensis AARA009694 N 0.554
AATE006267 Anopheles atroparvus AATE006267 N 0.586
ACHR002403 Anopheles christyi ACHR002403 N 0.554
ACOM033320 Anopheles coluzzii ACOM033320 N 0.554
ACUA003510 Anopheles culicifacies ACUA003510 N 0.554
ADIR002941 Anopheles dirus ADIR002941 N 0.586
AEPI008570 Anopheles epiroticus AEPI008570 N 0.554
AFAF018499 Anopheles farauti AFAF018499 N 0.554
fgeneshCV_pg.C_scaffold_2000022 Chlorella vulgaris fgeneshCV_pg.C_scaffold_2000022 N 0.483
ASIS023527 Anopheles sinensis ASIS023527 N 0.554
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N 0.571
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N 0.535
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N 0.535
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N 0.571
NECAME_12352 Necator americanus NECAME_12352 N 0.571
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N 0.582
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N 0.571
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N 0.480
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N 0.541
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N 0.571
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N 0.571
HCOI00594600 Haemonchus contortus HCOI00594600 N 0.571
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N 0.574
ASTEI04275 Anopheles stephensi ASTEI04275 N 0.554
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N 0.571
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N 0.571
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N 0.571
ANCCAN_29654 Ancylostoma caninum ANCCAN_29654 N 0.571
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N 0.571
ASU_10445 Ascaris suum ASU_10445 N 0.571
D918_07944 Trichuris suis D918_07944 N 0.417
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N 0.571
DILT_0001250601 Diphyllobothrium latum DILT_0001250601 N 0.454
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N 0.430
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N 0.599
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N 0.561
ccdc124 Oryzias latipes ENSORLG00000015728 N 0.440
F443_19335 Phytophthora parasitica F443_19335 N 0.716
fgenesh_scip_prom.28083.7036 Phytophthora lateralis fgenesh_scip_prom.28083.7036 N 0.741
fgenesh_scip_prom.46568.2049 Phytophthora kernoviae fgenesh_scip_prom.46568.2049 N 0.655
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N 0.540
HelroG66455 Helobdella robusta HelroG66455 N 0.564
HMEL009197 Heliconius melpomene HMEL009197 N 0.555
CRE03905 Caenorhabditis remanei CRE03905 N 0.565
CPIJ005084 Culex quinquefasciatus CPIJ005084 N 0.599
CJA05209 Caenorhabditis japonica CJA05209 N 0.565
SPRG_06372 Saprolegnia parasitica SPRG_06372 N 0.676
AAEL008417 Aedes aegypti AAEL008417 N 0.547
ADAC009894 Anopheles darlingi ADAC009894 N 0.586
AGAP004110 Anopheles gambiae AGAP004110 N 0.554
ALNC14_126360 Albugo laibachii ALNC14_126360 N 0.616
BGIBMGA013514 Bombyx mori BGIBMGA013514 N 0.526
CBN09380 Caenorhabditis brenneri CBN09380 N 0.565
CGI_10019404 Crassostrea gigas CGI_10019404 N 0.530
ISCW011313 Ixodes scapularis ISCW011313 N 0.532
LotgiG126557 Lottia gigantea LotgiG126557 N 0.487
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N 0.644
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N 0.495
PYU1_G003004 Pythium ultimum PYU1_G003004 N 0.676
fgenesh1_pm.2_#_13 Coccomyxa subellipsoidea C169 fgenesh1_pm.2_#_13 N 0.483
CLEC002888 Cimex lectularius CLEC002888 N 0.484
ETH_00032160 Eimeria tenella ETH_00032160 N 0.439
LCUP006380 Lucilia cuprina LCUP006380 N 0.475
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N 0.417
estExt_fgenesh1_kg.C_80399 Phytophthora capsici estExt_fgenesh1_kg.C_80399 N 0.683
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N 0.495
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N 0.571
TGME49_037260 Toxoplasma gondii TGME49_037260 N 0.442
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N 0.644
maker-pve_contig_105-snap-gene-0.29 Pythium vexans maker-pve_contig_105-snap-gene-0.29 N 0.632
ML11467a Mnemiopsis leidyi ML11467a N 0.470
PHUM036320 Pediculus humanus PHUM036320 N 0.525
Physo132366 Phytophthora sojae Physo132366 N 0.716
RPRC009760 Rhodnius prolixus RPRC009760 N 0.599
SPU_001776 Strongylocentrotus purpuratus SPU_001776 N 0.490
TC004658 Tribolium castaneum TC004658 N 0.434
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N 0.683