CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Physo156165
(
Phytophthora sojae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Physo156165
T331999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo156165
Sox
385
450
PHKNAYLHFSHARRDELAAENPSWSVQQVSAELGRQWKALSAAERKPWVELAQFDKARFHTEAHHH
Physo156165
Sox
474
523
PRQPDTAYICFWKSQRPEVVAANPFLAAPLVSKEVGRQWRALSDDERQPT
Physo156165
Sox
545
611
PKPAKTAFQLFMSHNRESFMLLNMTINEFRAEMSQLWKRLSDADKAEWHELAKEDQRRYDTEMNAYK
Physo156165
Sox
641
708
PRLPMNAYNCYLSAKRQELVDRRPGRKNPEIMREIGVTWKALSDDERAVYQRKADEDVERFRAEMEAH
Physo156165
Sox
754
821
PRRPKTAYNLMYMSKRTELLSTYQMSHNECSALCGKLWRQMSEAEREPYKRMAAEDKHRYEAELQVYN
Links
Other
Sox
family TFs
Other
Phytophthora sojae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.971
Phytophthora lateralis
fgenesh_scip_prom.28083.971
N
0.620
F443_04975
Phytophthora parasitica
F443_04975
N
0.600
PITG_17485
Phytophthora infestans
PITG_17485
N
0.587
PYU1_G005944
Pythium ultimum
PYU1_G005944
N
0.504
maker-pir_contig_324-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_324-fgenesh-gene-0.0
N
0.502
estExt_fgenesh1_pg.C_110314
Phytophthora capsici
estExt_fgenesh1_pg.C_110314
N
0.431