CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PICST_12709
(
Scheffersomyces stipitis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PICST_12709
T332000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ABN68619
Sox
126
197
PKRPTNAYLIFCDMEKERIRQEIEEKNPGSTIDLSKSMTEAWKNLDDEDRKPYYKLYEDDRIRYQTEMLAYN
Links
Other
Sox
family TFs
Other
Scheffersomyces stipitis
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gwh1.8.1.855.1
Pichia stipitis
gwh1.8.1.855.1
N
0.741
GNLVRS01_PISO0G08322g
Millerozyma farinosa
GNLVRS01_PISO0G08322g
N
0.636
GNLVRS01_PISO0H08323g
Millerozyma farinosa
GNLVRS01_PISO0H08323g
N
0.636
SPAPADRAFT_141112
Spathaspora passalidarum
SPAPADRAFT_141112
N
0.631
DEHA2F18194g
Debaryomyces hansenii
DEHA2F18194g
N
0.587
CORT_0B03230
Candida orthopsilosis
CORT_0B03230
N
0.587
HPODL_00357
Ogataea parapolymorpha
HPODL_00357
N
0.557
CD36_81110
Candida dubliniensis
CD36_81110
I
0.541
G210_3517
Candida maltosa
G210_3517
I
0.532
CPAG_00203
Candida parapsilosis
CPAG_00203
N
0.516
KUCA_T00005075001
Kuraishia capsulata
KUCA_T00005075001
N
0.500
LELG_02079
Lodderomyces elongisporus
LELG_02079
N
0.472
ZBAI_07968
Zygosaccharomyces bailii
ZBAI_07968
I
0.467
ZYRO0A04378g
Zygosaccharomyces rouxii
ZYRO0A04378g
I
0.467
TDEL_0D04120
Torulaspora delbrueckii
TDEL_0D04120
I
0.467
ZBAI_02112
Zygosaccharomyces bailii
ZBAI_02112
I
0.467
CTRG_02198
Candida tropicalis
CTRG_02198
N
0.458
YALI0_D17996g
Yarrowia lipolytica
YALI0_D17996g
N
0.456
NDAI_0A07360
Naumovozyma dairenensis
NDAI_0A07360
I
0.455
KLTH0G16566g
Lachancea thermotolerans
KLTH0G16566g
N
0.448
KLTH0G16566g
Kluyveromyces thermotolerans
KLTH0G16566g
N
0.448
Kwal_11003
Kluyveromyces waltii
Kwal_11003
N
0.448
SAKL0C11308g
Lachancea kluyveri
SAKL0C11308g
N
0.446
NCAS_0A10110
Naumovozyma castellii
NCAS_0A10110
I
0.426
Scas_Contig482.3
Saccharomyces castellii
Scas_Contig482.3
I
0.426
KAFR_0F02510
Kazachstania africana
KAFR_0F02510
I
0.420