PISMIDRAFT_655632 (Pisolithus microcarpus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PISMIDRAFT_655632 T332040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.468 0.304
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.468 0.304
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.441 0.420
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.441 0.420
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.441 0.420
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.441 0.420
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.441 0.420
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK21145 Sox 113 182

Links

Other Sox family TFs
Other Pisolithus microcarpus TFs

491 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g00204 Acanthocheilonema viteae nAv.1.0.1.g00204 N 0.000
ACYPI067723 Acyrthosiphon pisum ACYPI067723 I 0.000
ENSAPLG00000011062 Anas platyrhynchos ENSAPLG00000011062 I 0.000
ANCCAN_28303 Ancylostoma caninum ANCCAN_28303 N 0.000
AALB001245 Anopheles albimanus AALB001245 I 0.000
AARA005848 Anopheles arabiensis AARA005848 I 0.000
ACHR005004 Anopheles christyi ACHR005004 I 0.000
ACHR007975 Anopheles christyi ACHR007975 I 0.000
ACUA006364 Anopheles culicifacies ACUA006364 I 0.000
ACUA016236 Anopheles culicifacies ACUA016236 I 0.000
ADIR009742 Anopheles dirus ADIR009742 I 0.000
AEPI007688 Anopheles epiroticus AEPI007688 I 0.000
AEPI009864 Anopheles epiroticus AEPI009864 I 0.000
AFAF020744 Anopheles farauti AFAF020744 I 0.000
AFUN004920 Anopheles funestus AFUN004920 I 0.000
AFUN002667 Anopheles funestus AFUN002667 I 0.000
AMAM010839 Anopheles maculatus AMAM010839 I 0.000
AMIN006554 Anopheles minimus AMIN006554 I 0.000
AQUA000003 Anopheles quadriannulatus AQUA000003 I 0.000
AQUA006727 Anopheles quadriannulatus AQUA006727 I 0.000
ALUE_0001653301 Ascaris lumbricoides ALUE_0001653301 N 0.000
ACEP15305 Atta cephalotes ACEP15305 I 0.000
ACEP19559 Atta cephalotes ACEP19559 I 0.000
BGLB009051 Biomphalaria glabrata BGLB009051 I 0.000
BTMF_0001220401 Brugia timori BTMF_0001220401 N 0.000
Cflo_06474--XP_394848.3_APIME Camponotus floridanus Cflo_06474--XP_394848.3_APIME I 0.000
Cmyd_10010531 Chelonia mydas Cmyd_10010531 I 0.000
CLEC009744 Cimex lectularius CLEC009744 I 0.000
pax3/7-like Ciona intestinalis ENSCING00000013561 I 0.000
ENSCSAVG00000004794 Ciona savignyi ENSCSAVG00000004794 I 0.000
ENSCSAVG00000005353 Ciona savignyi ENSCSAVG00000005353 I 0.000
CpipJ_CPIJ014198 Culex pipiens CpipJ_CPIJ014198 I 0.000
CPIJ014198 Culex quinquefasciatus CPIJ014198 I 0.000
KGM_00017 Danaus plexippus KGM_00017 I 0.000
DAPPUDRAFT_9094 Daphnia pulex DAPPUDRAFT_9094 I 0.000
YQE_12760 Dendroctonus ponderosae YQE_12760 I 0.000
YQE_12757 Dendroctonus ponderosae YQE_12757 I 0.000
Pax3 Dipodomys ordii ENSDORG00000010324 I 0.000
EEL_0000119001 Elaeophora elaphi EEL_0000119001 N 0.000
GPUH_0000746301 Gongylonema pulchrum GPUH_0000746301 I 0.000
HHAL002779-PA Halyomorpha halys HHAL002779-PA I 0.000
HHAL001220-PA Halyomorpha halys HHAL001220-PA I 0.000
Hba_09393 Heterorhabditis bacteriophora Hba_09393 N 0.000
LDEC011614 Leptinotarsa decemlineata LDEC011614 I 0.000
LotgiG80560 Lottia gigantea LotgiG80560 I 0.000
LCUP011798 Lucilia cuprina LCUP011798 I 0.000
MESCA001873 Megaselia scalaris MESCA001873 I 0.000
ENSMGAG00000004645 Meleagris gallopavo ENSMGAG00000004645 I 0.000
maker-nMf.1.1.scaf03862-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf03862-augustus-gene-0.3 N 0.000
ENSMLUG00000002244 Myotis lucifugus ENSMLUG00000002244 I 0.000
NEMVEDRAFT_v1g119152 Nematostella vectensis NEMVEDRAFT_v1g119152 I 0.000
Ocbimv22007835m.g Octopus bimaculoides Ocbimv22007835m.g I 0.000
Ocbimv22021713m.g Octopus bimaculoides Ocbimv22021713m.g I 0.000
OESDEN_08717 Oesophagostomum dentatum OESDEN_08717 N 0.000
OFLC_0001260901 Onchocerca flexuosa OFLC_0001260901 N 0.000
nOo.2.0.1.g09807 Onchocerca ochengi nOo.2.0.1.g09807 I 0.000
nOo.2.0.1.g04238 Onchocerca ochengi nOo.2.0.1.g04238 N 0.000
WBGene00247364 Onchocerca volvulus WBGene00247364 N 0.000
scaffold324-EXSNAP2012.26 Pristionchus exspectatus scaffold324-EXSNAP2012.26 N 0.000
nRc.2.0.1.g45424 Romanomermis culicivorax nRc.2.0.1.g45424 N 0.000
A_02894 Schistosoma haematobium A_02894 N 0.000
Smp_142440 Schistosoma mansoni Smp_142440 N 0.000
SINV15875 Solenopsis invicta SINV15875 I 0.000
SPER_0001490801 Spirometra erinaceieuropaei SPER_0001490801 N 0.000
TRE_0000697601 Trichobilharzia regenti TRE_0000697601 I 0.000
Tal_R002397 Tyto alba Tal_R002397 I 0.000
PAX3 Vicugna pacos ENSVPAG00000000715 I 0.000
ENSXMAG00000017245 Xiphophorus maculatus ENSXMAG00000017245 I 0.000