PPA09738 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA09738 T332177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pop-1
M00712_2.00 		Caenorhabditis elegans
NNHDWVNNNN
NNNNBWHDNN		 PBM
Narasimhan et al.(2015)
pTH9135 		0.508 0.609
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA09738 Sox 112 182

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

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118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action