PPA09738 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA09738 T332177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.508 0.609
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA09738 Sox 112 182

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000989201 Angiostrongylus cantonensis ACAC_0000989201 I 0.531
ANCCEY_03081 Ancylostoma ceylanicum ANCCEY_03081 I 0.531
Aqu1.229819 Amphimedon queenslandica Aqu1.229819 I 0.444
ASU_03617 Ascaris suum ASU_03617 I 0.472
A_02446 Schistosoma haematobium A_02446 I 0.444
A_05769 Schistosoma haematobium A_05769 I 0.431
Bm6269 Brugia malayi Bm6269 I 0.518
BXY_1055900 Bursaphelenchus xylophilus BXY_1055900 I 0.476
CapteG103591 Capitella teleta CapteG103591 I 0.444
CBG04236 Caenorhabditis briggsae CBG04236 I 0.459
CBG10974 Caenorhabditis briggsae CBG10974 I 0.482
CBG11789 Caenorhabditis briggsae CBG11789 I 0.442
CBN07368 Caenorhabditis brenneri CBN07368 I 0.511
CBN13162 Caenorhabditis brenneri CBN13162 I 0.511
CBN28577 Caenorhabditis brenneri CBN28577 I 0.511
CGI_10027723 Crassostrea gigas CGI_10027723 I 0.444
CJA17392 Caenorhabditis japonica CJA17392 I 0.538
CJA33358 Caenorhabditis japonica CJA33358 I 0.538
CRE01231 Caenorhabditis remanei CRE01231 I 0.511
csin109327 Clonorchis sinensis csin109327 I 0.444
csin111647 Clonorchis sinensis csin111647 I 0.444
D915_00291 Fasciola hepatica D915_00291 I 0.444
D915_04767 Fasciola hepatica D915_04767 I 0.428
D915_11804 Fasciola hepatica D915_11804 I 0.431
D917_02294 Trichinella nativa D917_02294 I 0.423
D918_07819 Trichuris suis D918_07819 I 0.423
DICVIV_03179 Dictyocaulus viviparus DICVIV_03179 I 0.531
ECANG7_01705 Echinococcus canadensis ECANG7_01705 I 0.444
ECANG7_04138 Echinococcus canadensis ECANG7_04138 I 0.444
ECANG7_07082 Echinococcus canadensis ECANG7_07082 I 0.422
ECPE_0001492401 Echinostoma caproni ECPE_0001492401 I 0.456
ECPE_0001553401 Echinostoma caproni ECPE_0001553401 I 0.431
EEL_0000603701 Elaeophora elaphi EEL_0000603701 I 0.518
EFV61222 Trichinella spiralis EFV61222 I 0.423
EmuJ_000067900 Echinococcus multilocularis EmuJ_000067900 I 0.444
EmuJ_001128100 Echinococcus multilocularis EmuJ_001128100 I 0.422
ENSPFOG00000022291 Poecilia formosa ENSPFOG00000022291 I 0.440
ENSPFOG00000023950 Poecilia formosa ENSPFOG00000023950 I 0.447
ENSTNIG00000005814 Tetraodon nigroviridis ENSTNIG00000005814 I 0.417
ENSXMAG00000005211 Xiphophorus maculatus ENSXMAG00000005211 I 0.457
EVEC_0000710101 Enterobius vermicularis EVEC_0000710101 I 0.502
HCOI00182800 Haemonchus contortus HCOI00182800 I 0.531
HDID_0001020301 Hymenolepis diminuta HDID_0001020301 I 0.444
HelroG107147 Helobdella robusta HelroG107147 I 0.446
HelroG135970 Helobdella robusta HelroG135970 I 0.434
HmN_000273200 Hymenolepis microstoma HmN_000273200 I 0.444
HmN_000448500 Hymenolepis microstoma HmN_000448500 I 0.444
HmN_000682900 Hymenolepis microstoma HmN_000682900 I 0.422
HNAJ_0001324301 Hymenolepis nana HNAJ_0001324301 I 0.444
HPLM_0000349201 Haemonchus placei HPLM_0000349201 I 0.531
L596_g19706 Steinernema carpocapsae L596_g19706 I 0.468
L889_g18974 Steinernema feltiae L889_g18974 I 0.455
L892_g30963 Steinernema scapterisci L892_g30963 I 0.468
L893_g30363 Steinernema glaseri L893_g30363 I 0.468
L898_g18866 Steinernema monticolum L898_g18866 I 0.455
LOAG_17858 Loa loa LOAG_17858 I 0.518
MCOS_0000930001 Mesocestoides corti MCOS_0000930001 I 0.444
nAv.1.0.1.g00625 Acanthocheilonema viteae nAv.1.0.1.g00625 I 0.518
NBR_0000604901 Nippostrongylus brasiliensis NBR_0000604901 I 0.531
nDi.2.2.2.g04579 Dirofilaria immitis nDi.2.2.2.g04579 I 0.518
NECAME_05160 Necator americanus NECAME_05160 I 0.531
nLs.2.1.2.g07746 Litomosoides sigmodontis nLs.2.1.2.g07746 I 0.518
nOo.2.0.1.g05333 Onchocerca ochengi nOo.2.0.1.g05333 I 0.518
nRc.2.0.1.g16011 Romanomermis culicivorax nRc.2.0.1.g16011 I 0.432
Ocbimv22023772m.g Octopus bimaculoides Ocbimv22023772m.g I 0.444
pop-1 Caenorhabditis elegans WBGene00004077 D 0.508
PPA09737 Pristionchus pacificus PPA09737 I 0.586
PTRK_0001545900 Parastrongyloides trichosuri PTRK_0001545900 I 0.440
PXEA_0000093301 Protopolystoma xenopodis PXEA_0000093301 I 0.444
PXEA_0001732701 Protopolystoma xenopodis PXEA_0001732701 I 0.444
PXEA_0003152301 Protopolystoma xenopodis PXEA_0003152301 I 0.444
RSKR_0000644900 Rhabditophanes kr3021 RSKR_0000644900 I 0.447
SBAD_0000746301 Soboliphyme baturini SBAD_0000746301 I 0.426
scaffold1445-EXSNAP2012.1 Pristionchus exspectatus scaffold1445-EXSNAP2012.1 I 0.741
scaffold1445-EXSNAP2012.2 Pristionchus exspectatus scaffold1445-EXSNAP2012.2 I 0.586
SCUD_0000824101 Schistosoma curassoni SCUD_0000824101 I 0.431
Sjc_0088020 Schistosoma japonicum Sjc_0088020 I 0.431
Smp_131260 Schistosoma mansoni Smp_131260 I 0.431
Smp_148190 Schistosoma mansoni Smp_148190 I 0.431
SMRZ_0000877601 Schistosoma margrebowiei SMRZ_0000877601 I 0.431
SMRZ_0001315801 Schistosoma margrebowiei SMRZ_0001315801 I 0.444
SMRZ_0001391701 Schistosoma margrebowiei SMRZ_0001391701 I 0.444
SMTD_0001130701 Schistosoma mattheei SMTD_0001130701 I 0.444
SMTD_0001817301 Schistosoma mattheei SMTD_0001817301 I 0.431
SMU15001097 Schmidtea mediterranea SMU15001097 I 0.422
SMU15005587 Schmidtea mediterranea SMU15005587 I 0.422
SMU15009386 Schmidtea mediterranea SMU15009386 I 0.431
SMU15015111 Schmidtea mediterranea SMU15015111 I 0.444
SMU15019689 Schmidtea mediterranea SMU15019689 I 0.422
SMU15027530 Schmidtea mediterranea SMU15027530 I 0.444
SMU15036961 Schmidtea mediterranea SMU15036961 I 0.444
SMUV_0000161001 Syphacia muris SMUV_0000161001 I 0.502
SMUV_0000664701 Syphacia muris SMUV_0000664701 I 0.502
SPAL_0000777400 Strongyloides papillosus SPAL_0000777400 I 0.440
SPER_0003790901 Spirometra erinaceieuropaei SPER_0003790901 I 0.444
SROB_0000446201 Schistosoma rodhaini SROB_0000446201 I 0.431
SSLN_0001416001 Schistocephalus solidus SSLN_0001416001 I 0.444
SSLN_0001818401 Schistocephalus solidus SSLN_0001818401 I 0.444
SSTP_0000252100 Strongyloides stercoralis SSTP_0000252100 I 0.440
SVE_0421400 Strongyloides venezuelensis SVE_0421400 I 0.440
T265_02639 Opisthorchis viverrini T265_02639 I 0.444
T265_05265 Opisthorchis viverrini T265_05265 I 0.444
TASK_0000085101 Taenia asiatica TASK_0000085101 I 0.444
TASK_0000637001 Taenia asiatica TASK_0000637001 I 0.444
TCLT_0000616401 Thelazia callipaeda TCLT_0000616401 I 0.518
TCNE_0001771701 Toxocara canis TCNE_0001771701 I 0.472
TELCIR_21985 Teladorsagia circumcincta TELCIR_21985 I 0.531
TRE_0000445001 Trichobilharzia regenti TRE_0000445001 I 0.431
TRE_0001594201 Trichobilharzia regenti TRE_0001594201 I 0.444
TsM_000369100 Taenia solium TsM_000369100 I 0.444
TsM_001099200 Taenia solium TsM_001099200 I 0.444
TsM_001136700 Taenia solium TsM_001136700 I 0.422
TTAC_0000089501 Hydatigera taeniaeformis TTAC_0000089501 I 0.444
TTAC_0000904301 Hydatigera taeniaeformis TTAC_0000904301 I 0.444
TTAC_0001070201 Hydatigera taeniaeformis TTAC_0001070201 I 0.422
TTRE_0000080301 Trichuris trichiura TTRE_0000080301 I 0.423
WBGene00238322 Onchocerca volvulus WBGene00238322 I 0.518
WUBG_00857 Wuchereria bancrofti WUBG_00857 I 0.518