PPA10381 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA10381 T332178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA10381 Sox 37 57

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
e_gw1.88.21.1 Fragilariopsis cylindrus e_gw1.88.21.1 N 0.648
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.556
ENSTNIG00000011238 Tetraodon nigroviridis ENSTNIG00000011238 N 0.553
GLYMA02G25940 Glycine max GLYMA02G25940 N 0.550
PredSwiss_ASS2010_3146.2 Pneumocystis carinii PredSwiss_ASS2010_3146.2 N 0.541
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.540
RO3G_14677 Rhizopus oryzae RO3G_14677 N 0.539
CaO19.9298 Candida albicans CaO19.9298 N 0.538
CaO19.1730 Candida albicans CaO19.1730 N 0.538
Bra012244 Brassica rapa Bra012244 N 0.528
Bra016455 Brassica rapa Bra016455 N 0.528
Sjc_0095610 Schistosoma japonicum Sjc_0095610 N 0.511
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.511
Minc04648 Meloidogyne incognita Minc04648 N 0.502
Minc03634 Meloidogyne incognita Minc03634 N 0.502
ENSMEUG00000011116 Macropus eugenii ENSMEUG00000011116 I 0.501
HBP1 Echinops telfairi ENSETEG00000018542 I 0.501
Hbp1 Dipodomys ordii ENSDORG00000010576 I 0.501
HBP1 Sorex araneus ENSSARG00000007731 I 0.501
SPOG_05006 Schizosaccharomyces cryophilus SPOG_05006 N 0.495
H101_08199 Trichophyton interdigitale H101_08199 N 0.492
Ogr19131 Ophisaurus gracilis Ogr19131 N 0.491
HBP1 Homo sapiens ENSG00000105856 D 0.491
Hbp1 Mus musculus ENSMUSG00000002996 D 0.491
GH23191 Drosophila grimshawi FBgn0130648 N 0.487
Ocbimv22007316m.g Octopus bimaculoides Ocbimv22007316m.g N 0.485
ENSGMOG00000014613 Gadus morhua ENSGMOG00000014613 N 0.472
ENSTNIG00000019242 Tetraodon nigroviridis ENSTNIG00000019242 N 0.465
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.462
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.462
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.455
ENSORLG00000018700 Oryzias latipes ENSORLG00000018700 N 0.454
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.437
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.436
PK25712.1 Cannabis sativa PK25712.1 N 0.427
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.423
GLYMA01G03580 Glycine max GLYMA01G03580 I 0.421
Ciclev10033714m.g Citrus clementina Ciclev10033714m.g I 0.421