PRUPE_ppa011596mg (Prunus persica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PRUPE_ppa011596mg T332200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HMG-1
M02720_2.00
Pisum sativum
STYGTDHTY

RADHACRAS
SELEX
Mathelier et al.(2014)
MA0044.1
0.641 0.710
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ03783 Sox 38 107
EMJ03784 Sox 38 107
EMJ03785 Sox 95 144
EMJ03786 Sox 95 164
EMJ03787 Sox 95 164
EMJ03788 Sox 95 164
EMJ03789 Sox 38 107

Links

Other Sox family TFs
Other Prunus persica TFs

Invalid Input OrderBy

351 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action