CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV04_00198
(
Capronia semiimmersa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PV04_00198
T332249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.570
0.642
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW71973
Sox
118
184
PERPPSAYVIFSNRIREEVKDQNLSFTQIAKLVGDRWQKLDPAGKEPFEAQASAAKEKYNIQLSVYR
Links
Other
Sox
family TFs
Other
Capronia semiimmersa
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.714
G647_10093
Cladophialophora carrionii
G647_10093
I
0.714
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.712
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.712
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.712
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.707
PV10_01993
Exophiala mesophila
PV10_01993
I
0.705
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.703
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.685
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.678
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.678
PV11_09703
Exophiala sideris
PV11_09703
I
0.678
A1O1_01197
Capronia coronata
A1O1_01197
I
0.678
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.678
PV08_04655
Exophiala spinifera
PV08_04655
I
0.672
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.646
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.646
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.613
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.613
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.607
MBM_02410
Marssonina brunnea
MBM_02410
I
0.592
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.585
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
0.585
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.582
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.572
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.572
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.572
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.571
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.571
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.571
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.570
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.570
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.570
NCU02819
Neurospora crassa
NCU02819
D
0.570
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.564
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.561
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.560
EPUS_09213
Endocarpon pusillum
EPUS_09213
I
0.554
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.553
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.550
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.547
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.547
BBA_01214
Beauveria bassiana
BBA_01214
I
0.545
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
0.545
CCM_01555
Cordyceps militaris
CCM_01555
I
0.545
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.545
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.542
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.542
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.542
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.542
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.542
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.542
X797_001988
Metarhizium robertsii
X797_001988
I
0.542
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.541
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
0.540
W97_04202
Coniosporium apollinis
W97_04202
I
0.540
PV09_06887
Verruconis gallopava
PV09_06887
I
0.540
MPH_08050
Macrophomina phaseolina
MPH_08050
I
0.540
PTT_17082
Pyrenophora teres
PTT_17082
I
0.540
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
0.540
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
0.540
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
0.540
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
0.540
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
0.540
AB07914.1
Alternaria brassicicola
AB07914.1
I
0.540
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.540
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
0.540
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
0.540
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
0.540
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.536
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
0.536
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.534
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.530
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.530
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.530
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.530
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.530
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
0.527
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.521
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.516
COCVIDRAFT_115390
Bipolaris victoriae
COCVIDRAFT_115390
I
0.515
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.515
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.515
COCCADRAFT_24603
Bipolaris zeicola
COCCADRAFT_24603
I
0.515
mgf024995m
Mimulus guttatus
mgf024995m
I
0.507
SNOG_03674
Stagonospora nodorum
SNOG_03674
I
0.504
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.504
SNOG_03674
Phaeosphaeria nodorum
SNOG_03674
I
0.504
CLEC003860
Cimex lectularius
CLEC003860
I
0.499
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
0.481
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.476
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.475
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.475
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.470
TRIVIDRAFT_228694
Trichoderma virens
TRIVIDRAFT_228694
I
0.469
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
0.464
POPTR_0017s11460
Populus trichocarpa
POPTR_0017s11460
I
0.461
SapurV1A.0447s0140
Salix purpurea
SapurV1A.0447s0140
I
0.461
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.459
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.457
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.457
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.455
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.455
gw1.4.435.1
Cryphonectria parasitica
gw1.4.435.1
I
0.447
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.446
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.442
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.442
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.440
gw1.20.66.1
Ostreococcus RCC809
gw1.20.66.1
N
0.439
W97_01424
Coniosporium apollinis
W97_01424
I
0.437
FOMPIDRAFT_1026139
Fomitopsis pinicola
FOMPIDRAFT_1026139
I
0.437
gw1.30.62.1
Fragilariopsis cylindrus
gw1.30.62.1
N
0.435
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.435
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.435
fgenesh1_pg.C_scaffold_9000255
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_9000255
I
0.433
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.429
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.428
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.428
SELMODRAFT_159743
Selaginella moellendorffii
SELMODRAFT_159743
I
0.427
SELMODRAFT_166865
Selaginella moellendorffii
SELMODRAFT_166865
I
0.427
BTMF_0001006201
Brugia timori
BTMF_0001006201
I
0.425
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.425
Kpol_1065p34
Vanderwaltozyma polyspora
Kpol_1065p34
I
0.425
ACEP19638
Atta cephalotes
ACEP19638
I
0.425
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
0.425
MLOC_27773
Hordeum vulgare
MLOC_27773
I
0.424
F775_29723
Aegilops tauschii
F775_29723
I
0.424
Traes_1DS_C7F1E9F38
Triticum aestivum
Traes_1DS_C7F1E9F38
I
0.424
Traes_1BS_15F9D276D
Triticum aestivum
Traes_1BS_15F9D276D
I
0.424
Traes_1AS_3FCB35E65
Triticum aestivum
Traes_1AS_3FCB35E65
I
0.424
Minc04648
Meloidogyne incognita
Minc04648
N
0.423
Minc03634
Meloidogyne incognita
Minc03634
N
0.423
mgf001267m
Mimulus guttatus
mgf001267m
I
0.423
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.423
ENSCAFG00000016282
Canis familiaris
ENSCAFG00000016282
I
0.423
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.423
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.422
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.422
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.421
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.421
AMTR_s00046p00227790
Amborella trichopoda
AMTR_s00046p00227790
N
0.419
TPHA_0M01480
Tetrapisispora phaffii
TPHA_0M01480
I
0.418
TVAG_125540
Trichomonas vaginalis
TVAG_125540
I
0.418
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.418
HPODL_03671
Ogataea parapolymorpha
HPODL_03671
I
0.418
FOXG_01686
Fusarium oxysporum
FOXG_01686
I
0.417
FGRRES_07116
Fusarium graminearum
FGRRES_07116
I
0.417
PK18077.1
Cannabis sativa
PK18077.1
I
0.417
Ca_10804
Cicer arietinum
Ca_10804
I
0.416