CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RTG_00841
(
Rhodotorula glutinis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
RTG_00841
T332377_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGU12822
Sox
225
277
PKRPMTPFFRFCTEVRERQDRDVLGDETAITEQSKLLARAWKALSPEQKKIHT
Links
Other
Sox
family TFs
Other
Rhodotorula glutinis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC186524.3_FG005
Zea mays
AC186524.3_FG005
N
0.470
TPHA_0C04350
Tetrapisispora phaffii
TPHA_0C04350
N
0.440
Gorai.013G018500
Gossypium raimondii
Gorai.013G018500
I
0.437
Gorai.007G078500
Gossypium raimondii
Gorai.007G078500
N
0.433
HelroG148167
Helobdella robusta
HelroG148167
I
0.421
BN946_scf184985.g43
Trametes cinnabarina
BN946_scf184985.g43
N
0.421