CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_232950
(
Schizophyllum commune
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCHCODRAFT_232950
T332457_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cic
M06452_2.00
Drosophila melanogaster
YYCATTSA
TSAATGRR
B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386
0.441
0.385
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.436
0.354
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ00565
Sox
68
132
IPRPSNAFMIFRKWYAKKHAGEAGGALSRRAGDAWKALSLLDKAVWEDKAENEKQEHARRYPGWR
Links
Other
Sox
family TFs
Other
Schizophyllum commune
TFs
264 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy