SCLCIDRAFT_120630 (Scleroderma citrinum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SCLCIDRAFT_120630 T332479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Bbx
M00196_2.00
Mus musculus
TTCATTGA

TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.495 0.333
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA

TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.461 0.319
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA

TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.461 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIM61945 Sox 100 169

Links

Other Sox family TFs
Other Scleroderma citrinum TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL011414 Aedes aegypti AAEL011414 N 0.000
AAEL011425 Aedes aegypti AAEL011425 I 0.000
AALB010797 Anopheles albimanus AALB010797 N 0.000
AARA003413 Anopheles arabiensis AARA003413 N 0.000
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.000
ACEP16595 Atta cephalotes ACEP16595 I 0.000
ACHR003270 Anopheles christyi ACHR003270 N 0.000
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.000
ACOM026236 Anopheles coluzzii ACOM026236 N 0.000
ADAC005122 Anopheles darlingi ADAC005122 N 0.000
ADIR000495 Anopheles dirus ADIR000495 N 0.000
AEPI002535 Anopheles epiroticus AEPI002535 N 0.000
AFUN009599 Anopheles funestus AFUN009599 N 0.000
AGAP012334 Anopheles gambiae AGAP012334 N 0.000
AMAM007083 Anopheles maculatus AMAM007083 N 0.000
AMEC017787 Anopheles melas AMEC017787 N 0.000
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000
AQUA002990 Anopheles quadriannulatus AQUA002990 N 0.000
ASIS014204 Anopheles sinensis ASIS014204 N 0.000
A_01848 Schistosoma haematobium A_01848 N 0.000
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.000
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.000
BGIBMGA007393 Bombyx mori BGIBMGA007393 N 0.000
BGIOSGA023639 Oryza indica BGIOSGA023639 I 0.000
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.000
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.000
Bo2g160920 Brassica oleracea Bo2g160920 I 0.000
Bra029371 Brassica rapa Bra029371 I 0.000
BXY_0253100 Bursaphelenchus xylophilus BXY_0253100 N 0.000
CapteG172235 Capitella teleta CapteG172235 I 0.000
CBG20663 Caenorhabditis briggsae CBG20663 N 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.000
CLEC003860 Cimex lectularius CLEC003860 I 0.000
CPIJ002952 Culex quinquefasciatus CPIJ002952 N 0.000
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.000
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.000
CpipJ_CPIJ002952 Culex pipiens CpipJ_CPIJ002952 N 0.000
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.000
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.000
EDI_049480 Entamoeba dispar EDI_049480 N 0.000
EHI_045480 Entamoeba histolytica EHI_045480 N 0.000
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.000
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.000
HmgD Drosophila melanogaster FBgn0004362 N 0.000
HmgZ Drosophila melanogaster FBgn0010228 I 0.000
Ssrp Drosophila melanogaster FBgn0010278 N 0.000
HmgZ Drosophila yakuba FBgn0068145 I 0.000
HmgD Drosophila yakuba FBgn0068146 N 0.000
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.000
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.000
GF11622 Drosophila ananassae FBgn0088662 I 0.000
GF12460 Drosophila ananassae FBgn0089497 N 0.000
GF13265 Drosophila ananassae FBgn0090297 N 0.000
GG19998 Drosophila erecta FBgn0112197 N 0.000
GG20749 Drosophila erecta FBgn0112936 I 0.000
GG22136 Drosophila erecta FBgn0114310 N 0.000
GH20784 Drosophila grimshawi FBgn0128247 I 0.000
GH21124 Drosophila grimshawi FBgn0128586 N 0.000
GH21151 Drosophila grimshawi FBgn0128613 N 0.000
GI18728 Drosophila mojavensis FBgn0141467 N 0.000
GI18750 Drosophila mojavensis FBgn0141489 N 0.000
GI20867 Drosophila mojavensis FBgn0143601 I 0.000
GL11071 Drosophila persimilis FBgn0148681 N 0.000
GL16947 Drosophila persimilis FBgn0154551 N 0.000
GL17523 Drosophila persimilis FBgn0155126 I 0.000
GM13209 Drosophila sechellia FBgn0168140 N 0.000
GM15692 Drosophila sechellia FBgn0170608 I 0.000
GM15859 Drosophila sechellia FBgn0170775 N 0.000
GD11622 Drosophila simulans FBgn0183362 N 0.000
GD25013 Drosophila simulans FBgn0196325 N 0.000
GD25171 Drosophila simulans FBgn0196483 I 0.000
GJ20604 Drosophila virilis FBgn0207743 I 0.000
GJ21748 Drosophila virilis FBgn0208866 N 0.000
GJ21774 Drosophila virilis FBgn0208892 N 0.000
GK15658 Drosophila willistoni FBgn0217663 I 0.000
GK15924 Drosophila willistoni FBgn0217926 N 0.000
GK22092 Drosophila willistoni FBgn0224077 N 0.000
GE11532 Drosophila yakuba FBgn0229332 N 0.000
GA30453 Drosophila pseudoobscura FBgn0264590 N 0.000
fgenesh2_pg.scaffold_4000274 Monosiga brevicollis fgenesh2_pg.scaffold_4000274 N 0.000
GB54571 Apis mellifera GB54571 N 0.000
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.000
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.000
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.000
HMEL015307 Heliconius melpomene HMEL015307 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.000
KGM_13851 Danaus plexippus KGM_13851 N 0.000
KGM_13852 Danaus plexippus KGM_13852 I 0.000
L798_13679 Zootermopsis nevadensis L798_13679 N 0.000
LCUP005047 Lucilia cuprina LCUP005047 N 0.000
LCUP016801 Lucilia cuprina LCUP016801 N 0.000
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MCINX001064 Melitaea cinxia MCINX001064 I 0.000
MDOA007633 Musca domestica MDOA007633 N 0.000
MDOA009531 Musca domestica MDOA009531 N 0.000
MDOA014797 Musca domestica MDOA014797 I 0.000
MDP0000205665 Malus domestica MDP0000205665 I 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
ML09221a Mnemiopsis leidyi ML09221a N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.000
NV15871 Nasonia vitripennis NV15871 N 0.000
OB08G10120 Oryza brachyantha OB08G10120 N 0.000
OBART08G00070 Oryza barthii OBART08G00070 I 0.000
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.000
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.000
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.000
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.000
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.000
OS08G0101100 Oryza sativa OS08G0101100 I 0.000
PK03866.1 Cannabis sativa PK03866.1 I 0.000
Pm006054 Prunus mume Pm006054 I 0.000
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.000
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.000
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.000
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.000
RPRC006380 Rhodnius prolixus RPRC006380 I 0.000
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.000
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N 0.000
Si014434m.g Setaria italica Si014434m.g N 0.000
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N 0.000
Smp_148930 Schistosoma mansoni Smp_148930 N 0.000
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N 0.000
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.000
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.000
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
TC012866 Tribolium castaneum TC012866 N 0.000
TCM_007659 Theobroma cacao TCM_007659 I 0.000
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.000
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.000
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.000