SELMODRAFT_29503 (Selaginella moellendorffii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SELMODRAFT_29503 T332501_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.484 0.557
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.484 0.557
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.484 0.541
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.484 0.541
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ23136 Sox 1 61

Links

Other Sox family TFs
Other Selaginella moellendorffii TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_8183 Selaginella moellendorffii SELMODRAFT_8183 I 0.731
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.536
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.532
RO3G_04704 Rhizopus oryzae RO3G_04704 I 0.530
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.529
est_cluster_kg.Chr_07__66__3199198:1 Micromonas sp RCC299 est_cluster_kg.Chr_07__66__3199198:1 N 0.525
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.524
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.512
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.512
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.511
EuGene.0000050349 Micromonas pusilla EuGene.0000050349 I 0.509
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.503
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.502
gw1.9.300.1 Sporobolomyces roseus gw1.9.300.1 I 0.497
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.497
GLOINDRAFT_339088 Rhizophagus irregularis GLOINDRAFT_339088 I 0.497
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.496
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.495
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.491
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.491
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.484
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.484
NHP6A Saccharomyces cerevisiae YPR052C D 0.484
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.484
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.484
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.484
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.484
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.484
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.484
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.484
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.484
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.484
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.484
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.484
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.484
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.484
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.484
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.484
G210_1137 Candida maltosa G210_1137 I 0.484
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.484
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.483
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.483
gw1.1.800.1 Fragilariopsis cylindrus gw1.1.800.1 N 0.480
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.477
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.477
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.477
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.477
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.477
BGHDH14_bgh06194 Blumeria graminis BGHDH14_bgh06194 I 0.468
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.468
EMIHUDRAFT_434306 Emiliania huxleyi EMIHUDRAFT_434306 N 0.468
KNAG_0J02470 Kazachstania naganishii KNAG_0J02470 I 0.465
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.461
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.461
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.450
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.450
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.450
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.450
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.450
SEPMUDRAFT_150255 Sphaerulina musiva SEPMUDRAFT_150255 I 0.450
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.450
DOTSEDRAFT_74007 Dothistroma septosporum DOTSEDRAFT_74007 I 0.450
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.450
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.450
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.450
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.450
DEHA2D17710g Debaryomyces hansenii DEHA2D17710g I 0.450
AUEXF2481DRAFT_68224 Aureobasidium subglaciale AUEXF2481DRAFT_68224 I 0.450
M438DRAFT_311243 Aureobasidium pullulans M438DRAFT_311243 I 0.450
CANTEDRAFT_110112 Candida tenuis CANTEDRAFT_110112 I 0.450
SMAC_04223 Sordaria macrospora SMAC_04223 I 0.446
MAC_03215 Metarhizium acridum MAC_03215 I 0.446
F503_07006 Ophiostoma piceae uamh F503_07006 I 0.446
ATEG_04695 Aspergillus terreus CADATEAG00010213 I 0.446
CPUR_07262 Claviceps purpurea CPUR_07262 I 0.446
EV44_g2085 Erysiphe necator EV44_g2085 I 0.446
MAJ_00874 Metarhizium majus MAJ_00874 I 0.446
UV8b_6830 Ustilaginoidea virens UV8b_6830 I 0.446
X797_004147 Metarhizium robertsii X797_004147 I 0.446
MAM_02065 Metarhizium album MAM_02065 I 0.446
PDE_04795 Penicillium oxalicum PDE_04795 I 0.446
MGG_04489 Magnaporthe oryzae MGG_04489 I 0.446
MGU_02963 Metarhizium guizhouense MGU_02963 I 0.446
MBM_05761 Marssonina brunnea MBM_05761 I 0.446
MBR_03233 Metarhizium brunneum MBR_03233 I 0.446
MANI_001749 Metarhizium anisopliae MANI_001749 I 0.446
SAPIO_CDS3210 Scedosporium apiospermum SAPIO_CDS3210 I 0.446
e_gw1.34.410.1 Physcomitrella patens e_gw1.34.410.1 I 0.445
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.443
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.443
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.443
CD36_41610 Candida dubliniensis CD36_41610 I 0.443
CORT_0E02670 Candida orthopsilosis CORT_0E02670 I 0.443
GNLVRS01_PISO0N04523g Millerozyma farinosa GNLVRS01_PISO0N04523g I 0.443
e_gw1.1.2450.1 Mucor circinelloides e_gw1.1.2450.1 I 0.443
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.443
PV09_01265 Verruconis gallopava PV09_01265 I 0.443
CPAG_02417 Candida parapsilosis CPAG_02417 I 0.443
GLYMA13G05140 Glycine max GLYMA13G05140 I 0.441
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.439
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.438
RHTO_03328 Rhodosporidium toruloides RHTO_03328 I 0.434
SBOR_5988 Sclerotinia borealis SBOR_5988 I 0.434
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.432
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.432
AWRI1499_3752 Brettanomyces bruxellensis AWRI1499_3752 I 0.431
CNF04730 Cryptococcus neoformans CNF04730 I 0.429
L804_02852 Cryptococcus gattii L804_02852 I 0.429
A1O3_03664 Capronia epimyces A1O3_03664 I 0.427
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I 0.425
MGYG_02637 Microsporum gypseum MGYG_02637 I 0.423
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.422
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.422
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.422
CTHT_0010300 Chaetomium thermophilum CTHT_0010300 I 0.419
PHSY_006278 Pseudozyma hubeiensis PHSY_006278 I 0.418
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I 0.418
MCYG_05548 Microsporum canis MCYG_05548 I 0.416
TESG_06912 Trichophyton tonsurans TESG_06912 I 0.416
H105_01968 Trichophyton soudanense H105_01968 I 0.416
H102_01953 Trichophyton rubrum H102_01953 I 0.416
ARB_02895 Arthroderma benhamiae ARB_02895 I 0.416
MCYG_05548 Arthroderma otae MCYG_05548 I 0.416
TRV_07738 Trichophyton verrucosum TRV_07738 I 0.416