Si011290m.g (Setaria italica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Si011290m.g T332542_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si011290m Sox 24 93

Links

Other Sox family TFs
Other Setaria italica TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_06533 Aegilops tauschii F775_06533 N 0.576
BRADI5G18460 Brachypodium distachyon BRADI5G18460 N 0.611
HCOI01490000 Haemonchus contortus HCOI01490000 N 0.434
MLOC_57354 Hordeum vulgare MLOC_57354 N 0.482
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.513
gw1.29.97.1 Naegleria gruberi gw1.29.97.1 N 0.432
NBR_0001541101 Nippostrongylus brasiliensis NBR_0001541101 N 0.434
OBART04G21800 Oryza barthii OBART04G21800 N 0.568
OB04G28810 Oryza brachyantha OB04G28810 N 0.568
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.568
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.568
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.568
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.568
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.568
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.574
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.568
OS04G0564600 Oryza sativa OS04G0564600 N 0.568
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.478
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.478
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.415
Sb06g025440 Sorghum bicolor Sb06g025440 N 0.467
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.512
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N 0.576
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.512
GRMZM2G145968 Zea mays GRMZM2G145968 N 0.478