Si021575m.g (Setaria italica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Si021575m.g T332548_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si021575m Sox 504 572

Links

Other Sox family TFs
Other Setaria italica TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.648
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.648
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.648
F775_29723 Aegilops tauschii F775_29723 I 0.648
mgf024995m Mimulus guttatus mgf024995m I 0.423
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.638
Sb09g005650 Sorghum bicolor Sb09g005650 N 0.729
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.604
SSRP1-B Oryza sativa OS05G0182600 N 0.680
SSRP1-A Oryza sativa OS01G0184900 N 0.593
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.680
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.593
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.680
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.593
Si000646m.g Setaria italica Si000646m.g N 0.604
Si024096m.g Setaria italica Si024096m.g N 0.638
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.639
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.604
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.604
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.735
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.581
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.581
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.581
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.735
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.680
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.542
OB01G15440 Oryza brachyantha OB01G15440 N 0.593
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.562
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.680
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.593
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.729
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.604
F775_28104 Aegilops tauschii F775_28104 N 0.581
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.636
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.680
OB05G15230 Oryza brachyantha OB05G15230 N 0.680
OBART01G05540 Oryza barthii OBART01G05540 N 0.593
OBART05G05520 Oryza barthii OBART05G05520 N 0.680
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.542
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.680
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.593
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.680
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.593
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.593
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.680
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.680
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.593
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.593