CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SJAG_03603
(
Schizosaccharomyces japonicus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SJAG_03603
T332587_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.484
0.567
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.484
0.567
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.484
0.567
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.484
0.567
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEB08448
Sox
16
82
PKRNMSAFMFFSMSNREKIKEENPEATFGQIGSLLGKKWKTLTAVEKEPYEEKARKDKERYERECMK
Links
Other
Sox
family TFs
Other
Schizosaccharomyces japonicus
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA13G05140
Glycine max
GLYMA13G05140
I
0.570
estExt_Genewise1.C_20300
Phycomyces blakesleeanus
estExt_Genewise1.C_20300
I
0.561
estExt_Genewise1Plus.C_11422
Mucor circinelloides
estExt_Genewise1Plus.C_11422
I
0.555
estExt_fgeneshPB_pg.C_360007
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_360007
I
0.554
nhp6
Schizosaccharomyces pombe
SPAC57A10.09c
I
0.540
AMTR_s00078p00107740
Amborella trichopoda
AMTR_s00078p00107740
I
0.526
NDAI_0A05290
Naumovozyma dairenensis
NDAI_0A05290
I
0.521
RO3G_07751
Rhizopus oryzae
RO3G_07751
I
0.521
SELMODRAFT_8183
Selaginella moellendorffii
SELMODRAFT_8183
I
0.519
SOCG_02294
Schizosaccharomyces octosporus
SOCG_02294
I
0.516
Cla017295
Citrullus lanatus
Cla017295
I
0.514
mgf001267m
Mimulus guttatus
mgf001267m
I
0.514
Cucsa.339070
Cucumis sativus
Cucsa.339070
I
0.514
EFA82179.1
Polysphondylium pallidum
EFA82179.1
I
0.512
SELMODRAFT_29503
Selaginella moellendorffii
SELMODRAFT_29503
I
0.511
NCAS_0A11010
Naumovozyma castellii
NCAS_0A11010
I
0.509
Scas_Contig667.17
Saccharomyces castellii
Scas_Contig667.17
I
0.509
RO3G_04704
Rhizopus oryzae
RO3G_04704
I
0.508
SPOG_00531
Schizosaccharomyces cryophilus
SPOG_00531
I
0.507
fgeneshDP_kg.C_scaffold_625000001
Dictyostelium purpureum
fgeneshDP_kg.C_scaffold_625000001
I
0.507
fgeneshDP_kg.C_scaffold_93000006
Dictyostelium purpureum
fgeneshDP_kg.C_scaffold_93000006
I
0.507
TCM_018380
Theobroma cacao
TCM_018380
I
0.506
PRUPE_ppa002690mg
Prunus persica
PRUPE_ppa002690mg
I
0.506
chr2.CM0225.40.nc
Lotus japonicus
chr2.CM0225.40.nc
I
0.506
LjSGA_094514.1
Lotus japonicus
LjSGA_094514.1
I
0.506
Pm015842
Prunus mume
Pm015842
I
0.506
SPPG_05251
Spizellomyces punctatus
SPPG_05251
I
0.506
PNEG_03347
Pneumocystis murina
PNEG_03347
I
0.506
gene01265-v1.0-hybrid
Fragaria vesca
gene01265-v1.0-hybrid
I
0.506
gene01264-v1.0-hybrid
Fragaria vesca
gene01264-v1.0-hybrid
I
0.506
MDP0000828844
Malus domestica
MDP0000828844
I
0.504
KNAG_0H00800
Kazachstania naganishii
KNAG_0H00800
I
0.503
CAGL0H08541g
Candida glabrata
CAGL0H08541g
I
0.503
PK18077.1
Cannabis sativa
PK18077.1
I
0.503
PDK_20s1437671g003
Phoenix dactylifera
PDK_20s1437671g003
I
0.501
Ca_12487
Cicer arietinum
Ca_12487
I
0.499
MTR_1g022345
Medicago truncatula
MTR_1g022345
I
0.499
Ca_10804
Cicer arietinum
Ca_10804
I
0.499
MDP0000310093
Malus domestica
MDP0000310093
I
0.499
M407DRAFT_81488
Tulasnella calospora
M407DRAFT_81488
I
0.498
GSMUA_Achr2G19630_001
Musa acuminata
GSMUA_Achr2G19630_001
I
0.497
KAFR_0G01620
Kazachstania africana
KAFR_0G01620
I
0.496
L804_02852
Cryptococcus gattii
L804_02852
I
0.488
CNF04730
Cryptococcus neoformans
CNF04730
I
0.488
gw1.9.300.1
Sporobolomyces roseus
gw1.9.300.1
I
0.487
PGSC0003DMG400018099
Solanum tuberosum
PGSC0003DMG400018099
I
0.486
PGSC0003DMG400001414
Solanum tuberosum
PGSC0003DMG400001414
I
0.486
Solyc02g087710.2
Solanum lycopersicum
Solyc02g087710.2
I
0.486
MDP0000301546
Malus domestica
MDP0000301546
I
0.485
SAKL0B07150g
Lachancea kluyveri
SAKL0B07150g
I
0.484
SKUD_180604
Saccharomyces kudriavzevii
SKUD_180604
I
0.484
SKUD_201106
Saccharomyces kudriavzevii
SKUD_201106
I
0.484
KLTH0E14850g
Lachancea thermotolerans
KLTH0E14850g
I
0.484
ZBAI_05520
Zygosaccharomyces bailii
ZBAI_05520
I
0.484
KLTH0E14850g
Kluyveromyces thermotolerans
KLTH0E14850g
I
0.484
ZYRO0C15752g
Zygosaccharomyces rouxii
ZYRO0C15752g
I
0.484
906_YBR089C-A
Saccharomyces mikatae
906_YBR089C-A
I
0.484
25751_YPR052C
Saccharomyces bayanus
25751_YPR052C
I
0.484
1377_YBR089C-A
Saccharomyces paradoxus
1377_YBR089C-A
I
0.484
22477_YPR052C
Saccharomyces mikatae
22477_YPR052C
I
0.484
SU7_0186
Saccharomyces arboricola
SU7_0186
I
0.484
G210_1137
Candida maltosa
G210_1137
I
0.484
TDEL_0C04750
Torulaspora delbrueckii
TDEL_0C04750
I
0.484
SU7_3651
Saccharomyces arboricola
SU7_3651
I
0.484
2032_YBR089C-A
Saccharomyces bayanus
2032_YBR089C-A
I
0.484
ATHMG
Vitis vinifera
VIT_14s0108g00040
I
0.484
ZBAI_00368
Zygosaccharomyces bailii
ZBAI_00368
I
0.484
NHP6B
Saccharomyces cerevisiae
YBR089C-A
D
0.484
NHP6A
Saccharomyces cerevisiae
YPR052C
D
0.484
gww1.1.1.1342.1
Pichia stipitis
gww1.1.1.1342.1
I
0.483
Carubv10016819m.g
Capsella rubella
Carubv10016819m.g
I
0.483
Cagra.0535s0005
Capsella grandiflora
Cagra.0535s0005
I
0.483
PICST_23779
Scheffersomyces stipitis
PICST_23779
I
0.483
SSRP1
Arabidopsis thaliana
AT3G28730
I
0.483
evm.TU.supercontig_211.6
Carica papaya
evm.TU.supercontig_211.6
I
0.481
Thhalv10003803m.g
Eutrema salsugineum
Thhalv10003803m.g
I
0.479
NCAS_0I01260
Naumovozyma castellii
NCAS_0I01260
I
0.478
gw1.204.1.1
Dictyostelium purpureum
gw1.204.1.1
I
0.478
orange1.1g006512m.g
Citrus sinensis
orange1.1g006512m.g
I
0.478
Scas_Contig718.17
Saccharomyces castellii
Scas_Contig718.17
I
0.478
Ciclev10011266m.g
Citrus clementina
Ciclev10011266m.g
I
0.478
Kwal_12539
Kluyveromyces waltii
Kwal_12539
I
0.477
KLLA0_B12056g
Kluyveromyces lactis
KLLA0_B12056g
I
0.477
LELG_04337
Lodderomyces elongisporus
LELG_04337
I
0.477
LALA0_S09e03686g
Lachancea lanzarotensis
LALA0_S09e03686g
I
0.477
TBLA_0I02240
Tetrapisispora blattae
TBLA_0I02240
I
0.477
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
0.475
Kpol_1065p34
Vanderwaltozyma polyspora
Kpol_1065p34
I
0.475
e_gw1.1.2450.1
Mucor circinelloides
e_gw1.1.2450.1
I
0.469
BGIOSGA023639
Oryza indica
BGIOSGA023639
I
0.468
PAXRUDRAFT_828263
Paxillus rubicundulus
PAXRUDRAFT_828263
I
0.468
CY34DRAFT_810312
Suillus luteus
CY34DRAFT_810312
I
0.468
HYDPIDRAFT_138070
Hydnomerulius pinastri
HYDPIDRAFT_138070
I
0.468
BATDEDRAFT_89692
Batrachochytrium dendrobatidis
BATDEDRAFT_89692
I
0.468
estExt_fgeneshDP_kg.C_1050006
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1050006
I
0.467
TPHA_0M01480
Tetrapisispora phaffii
TPHA_0M01480
I
0.466
GLOINDRAFT_339088
Rhizophagus irregularis
GLOINDRAFT_339088
I
0.464
KUCA_T00001555001
Kuraishia capsulata
KUCA_T00001555001
I
0.462
M404DRAFT_63984
Pisolithus tinctorius
M404DRAFT_63984
I
0.462
HPODL_03671
Ogataea parapolymorpha
HPODL_03671
I
0.462
MDP0000165147
Malus domestica
MDP0000165147
N
0.461
KNAG_0J02470
Kazachstania naganishii
KNAG_0J02470
I
0.458
YALI0_C11671g
Yarrowia lipolytica
YALI0_C11671g
I
0.456
PGUG_05245
Candida guilliermondii
PGUG_05245
I
0.454
RHTO_03328
Rhodosporidium toruloides
RHTO_03328
I
0.454
CERSUDRAFT_85760
Ceriporiopsis subvermispora
CERSUDRAFT_85760
I
0.454
BN946_scf184999.g62
Trametes cinnabarina
BN946_scf184999.g62
I
0.454
MELLADRAFT_31192
Melampsora laricipopulina
MELLADRAFT_31192
I
0.454
cassava42041.valid.m1
Manihot esculenta
cassava42041.valid.m1
I
0.454
DICSQDRAFT_109066
Dichomitus squalens
DICSQDRAFT_109066
I
0.454
29822.m003476
Ricinus communis
29822.m003476
I
0.454
PGUG_05245
Meyerozyma guilliermondii
PGUG_05245
I
0.454
FIBRA_06299
Fibroporia radiculosa
FIBRA_06299
I
0.454
ATHMG
Arabidopsis lyrata
scaffold_500854.1
I
0.453
Gorai.006G024900
Gossypium raimondii
Gorai.006G024900
I
0.452
PV09_01265
Verruconis gallopava
PV09_01265
I
0.451
SPAPADRAFT_62621
Spathaspora passalidarum
SPAPADRAFT_62621
I
0.450
DEHA2D17710g
Debaryomyces hansenii
DEHA2D17710g
I
0.450
Kpol_376p1
Vanderwaltozyma polyspora
Kpol_376p1
I
0.450
mgf012563m
Mimulus guttatus
mgf012563m
I
0.450
GNLVRS01_PISO0M04390g
Millerozyma farinosa
GNLVRS01_PISO0M04390g
I
0.450
M437DRAFT_40541
Aureobasidium melanogenum
M437DRAFT_40541
I
0.449
CANTEDRAFT_110112
Candida tenuis
CANTEDRAFT_110112
I
0.447
CPUR_07262
Claviceps purpurea
CPUR_07262
I
0.445
X797_004147
Metarhizium robertsii
X797_004147
I
0.445
UV8b_6830
Ustilaginoidea virens
UV8b_6830
I
0.445
NCLIV_043670
Neospora caninum
NCLIV_043670
I
0.445
F503_07006
Ophiostoma piceae uamh
F503_07006
I
0.445
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
0.445
A1Q1_01571
Trichosporon asahii
A1Q1_01571
I
0.445
SMAC_04223
Sordaria macrospora
SMAC_04223
I
0.445
SAPIO_CDS3210
Scedosporium apiospermum
SAPIO_CDS3210
I
0.445
MGU_02963
Metarhizium guizhouense
MGU_02963
I
0.445
MBM_05761
Marssonina brunnea
MBM_05761
I
0.445
MBR_03233
Metarhizium brunneum
MBR_03233
I
0.445
MANI_001749
Metarhizium anisopliae
MANI_001749
I
0.445
MAJ_00874
Metarhizium majus
MAJ_00874
I
0.445
MAC_03215
Metarhizium acridum
MAC_03215
I
0.445
MAM_02065
Metarhizium album
MAM_02065
I
0.445
M438DRAFT_311243
Aureobasidium pullulans
M438DRAFT_311243
I
0.444
fgenesh1_pg.C_chr_2000123
Mycosphaerella graminicola
fgenesh1_pg.C_chr_2000123
I
0.443
CPAG_02417
Candida parapsilosis
CPAG_02417
I
0.443
FOMPIDRAFT_1026139
Fomitopsis pinicola
FOMPIDRAFT_1026139
I
0.443
Mycgr3G90433
Zymoseptoria tritici
Mycgr3G90433
I
0.443
estExt_Genewise1Plus.C_80270
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_80270
I
0.443
MYCFIDRAFT_57980
Pseudocercospora fijiensis
MYCFIDRAFT_57980
I
0.443
Ecym_7459
Eremothecium cymbalariae
Ecym_7459
I
0.443
EMIHUDRAFT_252069
Emiliania huxleyi
EMIHUDRAFT_252069
N
0.443
PHLGIDRAFT_113118
Phlebiopsis gigantea
PHLGIDRAFT_113118
I
0.443
Bostr.0556s0524
Boechera stricta
Bostr.0556s0524
I
0.443
AACERI_AaceriADL310W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL310W
I
0.443
AGOS_ADL310W
Ashbya gossypii
AGOS_ADL310W
I
0.443
GNLVRS01_PISO0N04523g
Millerozyma farinosa
GNLVRS01_PISO0N04523g
I
0.443
BOTBODRAFT_30512
Botryobasidium botryosum
BOTBODRAFT_30512
N
0.443
CD36_41610
Candida dubliniensis
CD36_41610
I
0.443
Aquca_002_00505
Aquilegia coerulea
Aquca_002_00505
I
0.443
CORT_0E02670
Candida orthopsilosis
CORT_0E02670
I
0.443
GLYMA03G03771
Glycine max
GLYMA03G03771
N
0.443
CHLREDRAFT_189879
Chlamydomonas reinhardtii
CHLREDRAFT_189879
N
0.442
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.441
fgenesh1_pg.C_scaffold_9000255
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_9000255
I
0.441
nhp6
Dictyostelium discoideum
DDB_G0270260
N
0.441
JL09_g4180
Pichia kudriavzevii
JL09_g4180
I
0.440
17746
Aureococcus anophagefferens
17746
I
0.439
PDE_04795
Penicillium oxalicum
PDE_04795
I
0.439
ATEG_04695
Aspergillus terreus
CADATEAG00010213
I
0.439
MGG_04489
Magnaporthe oryzae
MGG_04489
I
0.439
SEPMUDRAFT_150255
Sphaerulina musiva
SEPMUDRAFT_150255
I
0.438
Bra033055
Brassica rapa
Bra033055
N
0.438
PHSY_006278
Pseudozyma hubeiensis
PHSY_006278
I
0.438
DOTSEDRAFT_74007
Dothistroma septosporum
DOTSEDRAFT_74007
I
0.438
AUEXF2481DRAFT_68224
Aureobasidium subglaciale
AUEXF2481DRAFT_68224
I
0.438
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.436
JAAARDRAFT_49184
Jaapia argillacea
JAAARDRAFT_49184
I
0.435
Moror_35
Moniliophthora roreri
Moror_35
I
0.435
AGABI2DRAFT_56560
Agaricus bisporus
AGABI2DRAFT_56560
I
0.435
SERLA73DRAFT_187779
Serpula lacrymans
SERLA73DRAFT_187779
I
0.435
PLICRDRAFT_46399
Plicaturopsis crispa
PLICRDRAFT_46399
I
0.435
SCHCODRAFT_76744
Schizophyllum commune
SCHCODRAFT_76744
I
0.435
CC1G_11882
Coprinopsis cinerea
CC1G_11882
I
0.435
PLEOSDRAFT_1048718
Pleurotus ostreatus
PLEOSDRAFT_1048718
I
0.435
GLOTRDRAFT_99857
Gloeophyllum trabeum
GLOTRDRAFT_99857
I
0.435
GALMADRAFT_227783
Galerina marginata
GALMADRAFT_227783
I
0.435
PILCRDRAFT_812728
Piloderma croceum
PILCRDRAFT_812728
I
0.435
M413DRAFT_45791
Hebeloma cylindrosporum
M413DRAFT_45791
I
0.435
M378DRAFT_77996
Amanita muscaria
M378DRAFT_77996
I
0.435
A1O3_03664
Capronia epimyces
A1O3_03664
I
0.433
PredSwiss_ASS2010_160.1
Pneumocystis carinii
PredSwiss_ASS2010_160.1
I
0.433
PHACADRAFT_164552
Phanerochaete carnosa
PHACADRAFT_164552
I
0.433
PISMIDRAFT_678929
Pisolithus microcarpus
PISMIDRAFT_678929
I
0.431
M404DRAFT_29654
Pisolithus tinctorius
M404DRAFT_29654
I
0.431
estExt_Genewise1.C_130158
Chlorella vulgaris
estExt_Genewise1.C_130158
I
0.430
GLYMA01G33240
Glycine max
GLYMA01G33240
I
0.430
estExt_fgenesh1_pm.C_130068
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_130068
I
0.430
gw1.199.74.1
Physcomitrella patens
gw1.199.74.1
I
0.429
TCM_014800
Theobroma cacao
TCM_014800
N
0.429
29701.m000600
Ricinus communis
29701.m000600
I
0.427
K443DRAFT_671387
Laccaria amethystina
K443DRAFT_671387
I
0.427
LACBIDRAFT_184303
Laccaria bicolor
LACBIDRAFT_184303
I
0.427
SBOR_5988
Sclerotinia borealis
SBOR_5988
I
0.427
Ciclev10012868m.g
Citrus clementina
Ciclev10012868m.g
I
0.427
orange1.1g030283m.g
Citrus sinensis
orange1.1g030283m.g
I
0.427
PGTG_04701
Puccinia graminis
PGTG_04701
I
0.424
BGHDH14_bgh06194
Blumeria graminis
BGHDH14_bgh06194
I
0.424
AWRI1499_3752
Brettanomyces bruxellensis
AWRI1499_3752
I
0.424
MSY001_2636
Malassezia sympodialis
MSY001_2636
I
0.424
PTTG_09594
Puccinia triticina
PTTG_09594
I
0.424
mgf024995m
Mimulus guttatus
mgf024995m
I
0.422
UM02364
Ustilago maydis
UM02364
I
0.420
PaG_04789
Pseudozyma aphidis
PaG_04789
I
0.420
PSEUBRA_SCAF4g05002
Pseudozyma brasiliensis
PSEUBRA_SCAF4g05002
I
0.420
PAN0_004d2231
Pseudozyma antarctica
PAN0_004d2231
I
0.420
UHOR_03854
Ustilago hordei
UHOR_03854
I
0.420
MPER_13045
Moniliophthora perniciosa
MPER_13045
I
0.419
AOL_s00043g650
Arthrobotrys oligospora
AOL_s00043g650
I
0.418
MGYG_02637
Microsporum gypseum
MGYG_02637
I
0.416