SKUD_167206 (Saccharomyces kudriavzevii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SKUD_167206 T332593_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.733 0.985
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.733 0.985
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.733 0.985
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43513 Sox 94 158

Links

Other Sox family TFs
Other Saccharomyces kudriavzevii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.733
NHP10 Saccharomyces cerevisiae YDL002C D 0.733
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.733
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.733
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.673
KAFR_0F02510 Kazachstania africana KAFR_0F02510 I 0.662
CAGL0M10505g Candida glabrata CAGL0M10505g I 0.627
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I 0.626
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I 0.604
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I 0.584
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I 0.563
NCAS_0A10110 Naumovozyma castellii NCAS_0A10110 I 0.556
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I 0.556
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I 0.546
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I 0.546
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I 0.544
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I 0.539
G210_3517 Candida maltosa G210_3517 I 0.441
CD36_81110 Candida dubliniensis CD36_81110 I 0.419
Ecym_5292 Eremothecium cymbalariae Ecym_5292 I 0.417
AACERI_AaceriAEL005C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL005C I 0.417
LALA0_S09e06216g Lachancea lanzarotensis LALA0_S09e06216g I 0.415