SMAR012744 (Strigamia maritima)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SMAR012744 T332639_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bbx
M03975_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
bbx_1 		0.579 0.594
BBX
M05763_2.00 		Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX 		0.484 0.565
BBX
M05764_2.00 		Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX 		0.484 0.565
Bbx
M00196_2.00 		Mus musculus
TTCATTGA
TCAATGAA		 PBM
Badis et al.(2009)
Bbx_3753 		0.450 0.551
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR012744-PA Sox 26 97

Links

Other Sox family TFs
Other Strigamia maritima TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ISCW010061 Ixodes scapularis ISCW010061 I 0.631
BGIBMGA008274 Bombyx mori BGIBMGA008274 I 0.631
HMEL012996 Heliconius melpomene HMEL012996 I 0.631
L798_02329 Zootermopsis nevadensis L798_02329 I 0.612
LCUP006498 Lucilia cuprina LCUP006498 I 0.594
tetur23g01950 Tetranychus urticae tetur23g01950 I 0.590
MDOA012813 Musca domestica MDOA012813 I 0.588
Hsal_01854--XP_624175.2_APIME Harpegnathos saltator Hsal_01854--XP_624175.2_APIME I 0.586
CPIJ005582 Culex quinquefasciatus CPIJ005582 I 0.580
CpipJ_CPIJ005582 Culex pipiens CpipJ_CPIJ005582 I 0.580
AAEL011161 Aedes aegypti AAEL011161 I 0.580
GG19727 Drosophila erecta FBgn0111928 I 0.579
GA16961 Drosophila pseudoobscura FBgn0076975 I 0.579
GI21541 Drosophila mojavensis FBgn0144271 I 0.579
GE17925 Drosophila yakuba FBgn0235361 I 0.579
bbx Drosophila melanogaster FBgn0024251 D 0.579
GK25081 Drosophila willistoni FBgn0227040 I 0.579
GJ16014 Drosophila virilis FBgn0203199 I 0.579
GM23082 Drosophila sechellia FBgn0177950 I 0.579
GF20922 Drosophila ananassae FBgn0097927 I 0.579
BGLB009093 Biomphalaria glabrata BGLB009093 I 0.562
GB48450 Apis mellifera GB48450 I 0.554
KGM_16790 Danaus plexippus KGM_16790 I 0.554
SINV12425 Solenopsis invicta SINV12425 I 0.554
Cflo_04908--XP_624175.2_APIME Camponotus floridanus Cflo_04908--XP_624175.2_APIME I 0.554
TC007499 Tribolium castaneum TC007499 I 0.540
CGI_10018417 Crassostrea gigas CGI_10018417 I 0.538
LotgiG89909 Lottia gigantea LotgiG89909 I 0.537
CapteG223458 Capitella teleta CapteG223458 I 0.533
CapteG39110 Capitella teleta CapteG39110 I 0.533
ASTEI00827 Anopheles stephensi ASTEI00827 I 0.509
LDEC000948 Leptinotarsa decemlineata LDEC000948 I 0.507
YQE_06837 Dendroctonus ponderosae YQE_06837 I 0.507
ENSPFOG00000000813 Poecilia formosa ENSPFOG00000000813 I 0.491
bbx Oryzias latipes ENSORLG00000005486 I 0.491
ENSAMXG00000017656 Astyanax mexicanus ENSAMXG00000017656 I 0.491
BBX Loxodonta africana ENSLAFG00000006362 I 0.491
bbx Gasterosteus aculeatus ENSGACG00000020111 I 0.491
ENSXMAG00000009457 Xiphophorus maculatus ENSXMAG00000009457 I 0.491
ENSGMOG00000015829 Gadus morhua ENSGMOG00000015829 I 0.491
ASTEI11145 Anopheles stephensi ASTEI11145 I 0.490
ENSONIG00000004775 Oreochromis niloticus ENSONIG00000004775 I 0.488
BBX Myotis lucifugus ENSMLUG00000007351 I 0.488
Myotis_brandtii_BBX_10016000 Myotis brandtii Myotis_brandtii_BBX_10016000 I 0.488
ACEP13490 Atta cephalotes ACEP13490 I 0.486
Tal_R013114 Tyto alba Tal_R013114 I 0.484
BBX Cavia porcellus ENSCPOG00000003575 I 0.484
BBX Felis catus ENSFCAG00000007296 I 0.484
BBX Echinops telfairi ENSETEG00000005122 I 0.484
ENSAMEG00000002574 Ailuropoda melanoleuca ENSAMEG00000002574 I 0.484
BBX Canis familiaris ENSCAFG00000009867 I 0.484
bbx.L Xenopus laevis XB-GENE-981431 I 0.484
BBX Bos taurus ENSBTAG00000006893 I 0.484
XP_002932333 Xenopus tropicalis XP_002932333 I 0.484
BBX Erinaceus europaeus ENSEEUG00000014092 I 0.484
ENSCSAG00000006313 Chlorocebus sabaeus ENSCSAG00000006313 I 0.484
BBX Equus caballus ENSECAG00000023413 I 0.484
Aan_R014485 Calypte anna Aan_R014485 I 0.484
Afo_R006638 Aptenodytes forsteri Afo_R006638 I 0.484
Alligator_sinensis_CCG019960.1 Alligator sinensis Alligator_sinensis_CCG019960.1 I 0.484
bbx Danio rerio ENSDARG00000012699 I 0.484
ENSBTAP00000009058-D1 Bos grunniens ENSBTAP00000009058-D1 I 0.484
BBX Callithrix jacchus ENSCJAG00000004843 I 0.484
BBX Homo sapiens ENSG00000114439 D 0.484
Bbx Dipodomys ordii ENSDORG00000008169 I 0.484
ENSMMUP00000011518 Macaca fascicularis ENSMMUP00000011518 I 0.484
BBX Dasypus novemcinctus ENSDNOG00000013923 I 0.484
Cmyd_10015225 Chelonia mydas Cmyd_10015225 I 0.484
ENSAPLG00000005336 Anas platyrhynchos ENSAPLG00000005336 I 0.484
BBX Vicugna pacos ENSVPAG00000007818 I 0.484
BBX Otolemur garnettii ENSOGAG00000008056 I 0.484
BBX Ochotona princeps ENSOPRG00000017013 I 0.484
ENSPANG00000018335 Papio anubis ENSPANG00000018335 I 0.484
BBX Procavia capensis ENSPCAG00000013443 I 0.484
BBX Oryctolagus cuniculus ENSOCUG00000001686 I 0.484
ENSOARG00000018829 Ovis aries ENSOARG00000018829 I 0.484
ENSMPUG00000009907 Mustela putorius furo ENSMPUG00000009907 I 0.484
BBX Monodelphis domestica ENSMODG00000001748 I 0.484
BBX Macaca mulatta ENSMMUG00000008787 I 0.484
ENSNLEG00000003524 Nomascus leucogenys ENSNLEG00000003524 I 0.484
BBX Ornithorhynchus anatinus ENSOANG00000007497 I 0.484
ENSPSIG00000015872 Pelodiscus sinensis ENSPSIG00000015872 I 0.484
ENSPPYG00000013578 Pongo abelii ENSPPYG00000013578 I 0.484
ENSLACG00000001134 Latimeria chalumnae ENSLACG00000001134 I 0.484
bbx Tetraodon nigroviridis ENSTNIG00000008596 I 0.484
BBX Gorilla gorilla ENSGGOG00000028441 I 0.484
ENSTSYG00000000857 Tarsius syrichta ENSTSYG00000000857 I 0.484
BBX Tursiops truncatus ENSTTRG00000013182 I 0.484
BBX Pan troglodytes ENSPTRG00000015187 I 0.484
BBX Sus scrofa ENSSSCG00000011943 I 0.484
BBX Pteropus vampyrus ENSPVAG00000010534 I 0.484
BBX Meleagris gallopavo ENSMGAG00000014384 I 0.484
ENSSHAG00000003009 Sarcophilus harrisii ENSSHAG00000003009 I 0.484
Ogr11041 Ophisaurus gracilis Ogr11041 I 0.481
Gfo_R002593 Geospiza fortis Gfo_R002593 I 0.481
ENSTGUG00000013611 Taeniopygia guttata ENSTGUG00000013611 I 0.481
Pvit_02469 Pogona vitticeps Pvit_02469 I 0.481
ENSFALG00000006478 Ficedula albicollis ENSFALG00000006478 I 0.481
Brh_R008020 Buceros rhinoceros Brh_R008020 I 0.481
BBX Anolis carolinensis ENSACAG00000006532 I 0.481
AFUN003674 Anopheles funestus AFUN003674 I 0.473
Sakowv30039572m.g Saccoglossus kowalevskii Sakowv30039572m.g I 0.471
AMIN000258 Anopheles minimus AMIN000258 I 0.470
AFAF016820 Anopheles farauti AFAF016820 I 0.463
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.462
GL20955 Drosophila persimilis FBgn0158550 I 0.458
bbx Takifugu rubripes ENSTRUG00000003077 I 0.457
ENSLOCG00000005165 Lepisosteus oculatus ENSLOCG00000005165 I 0.450
Bbx Mus musculus ENSMUSG00000022641 D 0.450
Bbx Rattus norvegicus ENSRNOG00000001971 I 0.450
HHAL010565-PA Halyomorpha halys HHAL010565-PA N 0.446
ADIR003385 Anopheles dirus ADIR003385 I 0.441
AMAM016153 Anopheles maculatus AMAM016153 I 0.433
PHUM230960 Pediculus humanus PHUM230960 I 0.430
ADAC009062 Anopheles darlingi ADAC009062 I 0.426
Sjc_0093980 Schistosoma japonicum Sjc_0093980 I 0.417
Smp_142600 Schistosoma mansoni Smp_142600 I 0.417
SCUD_0001673101 Schistosoma curassoni SCUD_0001673101 I 0.417
B_00914 Schistosoma haematobium B_00914 I 0.417
CBN17413 Caenorhabditis brenneri CBN17413 I 0.416
CJA07419 Caenorhabditis japonica CJA07419 I 0.416
L898_g8837 Steinernema monticolum L898_g8837 I 0.415
L893_g26751 Steinernema glaseri L893_g26751 I 0.415
L892_g3879 Steinernema scapterisci L892_g3879 I 0.415
nDi.2.2.2.g01012 Dirofilaria immitis nDi.2.2.2.g01012 I 0.415
OESDEN_00065 Oesophagostomum dentatum OESDEN_00065 I 0.415
TCLT_0000608401 Thelazia callipaeda TCLT_0000608401 I 0.415
OFLC_0001331401 Onchocerca flexuosa OFLC_0001331401 I 0.415
L889_g11174 Steinernema feltiae L889_g11174 I 0.415
nOo.2.0.1.g00287 Onchocerca ochengi nOo.2.0.1.g00287 I 0.415
nLs.2.1.2.g07996 Litomosoides sigmodontis nLs.2.1.2.g07996 I 0.415
ASU_10300 Ascaris suum ASU_10300 I 0.415
WUBG_04884 Wuchereria bancrofti WUBG_04884 I 0.415
LOAG_17202 Loa loa LOAG_17202 I 0.415
Bm5934 Brugia malayi Bm5934 I 0.415
WBGene00241539 Onchocerca volvulus WBGene00241539 I 0.415
ANCCAN_00149 Ancylostoma caninum ANCCAN_00149 I 0.415
ANCCEY_04123 Ancylostoma ceylanicum ANCCEY_04123 I 0.415
Hba_18941 Heterorhabditis bacteriophora Hba_18941 I 0.415
ASIM_0000334601 Anisakis simplex ASIM_0000334601 I 0.415
ANCDUO_05529 Ancylostoma duodenale ANCDUO_05529 I 0.415
L596_g5739 Steinernema carpocapsae L596_g5739 I 0.415